RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 INSL5Q9Y5Q6 135 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 STK24Q9Y6E0 443 aa10.58□□□□□ -0.72
CCM2-210ENST00000478169 CNOT1A5YKK6 2376 aaKnown RBP10.58□□□□□ -0.72
CCM2-210ENST00000478169 KMT2BQ9UMN6 2715 aaPredicted RBP10.57□□□□□ -0.72
CCM2-210ENST00000478169 CCDC169A6NNP5 214 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 JAK2O60674 1132 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 LRP3O75074 770 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 MCF2P10911 925 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 CCT6AP40227 531 aaKnown RBP10.57□□□□□ -0.72
CCM2-210ENST00000478169 CCR2P41597 374 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 FXR2P51116 673 aaKnown RBP eCLIP10.57□□□□□ -0.72
CCM2-210ENST00000478169 CCR3P51677 355 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 FOSBP53539 338 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 EPHA5P54756 1037 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 ARPP19P56211 112 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 GRM2Q14416 872 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 PDIA5Q14554 519 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 ZNF174Q15697 407 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 ZNF568Q3ZCX4 644 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 CTXN3Q4LDR2 81 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 LAIR1Q6GTX8 287 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 ZNF280DQ6N043 979 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 C1orf228Q6PIY5 440 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 CEP120Q8N960 986 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 APPL2Q8NEU8 664 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 E2F7Q96AV8 911 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 SUSD3Q96L08 255 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 ZMAT2Q96NC0 199 aaKnown RBP10.57□□□□□ -0.72
CCM2-210ENST00000478169 CNTNAP3BQ96NU0 1288 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 ACAP3Q96P50 834 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 MRPL4Q9BYD3 311 aaKnown RBP10.57□□□□□ -0.72
CCM2-210ENST00000478169 CNTNAP3Q9BZ76 1288 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 CDT1Q9H211 546 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 FOXP1Q9H334 677 aaPredicted RBP10.57□□□□□ -0.72
CCM2-210ENST00000478169 LMAN1LQ9HAT1 526 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 POLD4Q9HCU8 107 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 CNTN3Q9P232 1028 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 AFF4Q9UHB7 1163 aaKnown RBP10.57□□□□□ -0.72
CCM2-210ENST00000478169 KIAA1024Q9UPX6 916 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 RBM19Q9Y4C8 960 aaKnown RBP10.57□□□□□ -0.72
CCM2-210ENST00000478169 SDK1Q7Z5N4 2213 aa10.57□□□□□ -0.72
CCM2-210ENST00000478169 NUP210Q8TEM1 1887 aaPredicted RBP10.56□□□□□ -0.72
CCM2-210ENST00000478169 PROZP22891 400 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 GDI1P31150 447 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 NPTX2P47972 431 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 CXCL12P48061 93 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 TRAPPC10P48553 1259 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 PEX3P56589 373 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 OSTNP61366 133 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 DMP1Q13316 513 aaPredicted RBP10.56□□□□□ -0.72
CCM2-210ENST00000478169 ECM1Q16610 540 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 VITQ6UXI7 678 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 MFSD6LQ8IWD5 586 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 MSANTD3Q96H12 275 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 ZSWIM3Q96MP5 696 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 TCHPQ9BT92 498 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 OXCT2Q9BYC2 517 aaPredicted RBP10.56□□□□□ -0.72
CCM2-210ENST00000478169 C17orf75Q9HAS0 396 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 PARD6AQ9NPB6 346 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 ASAH2Q9NR71 780 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 ARHGAP28Q9P2N2 729 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 LRWD1Q9UFC0 647 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 KCNG1Q9UIX4 513 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 PIAS3Q9Y6X2 628 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 GREB1Q4ZG55 1949 aa10.56□□□□□ -0.72
CCM2-210ENST00000478169 MAP1BP46821 2468 aaKnown RBP10.56□□□□□ -0.72
CCM2-210ENST00000478169 NRG2O14511 850 aaPredicted RBP10.55□□□□□ -0.72
CCM2-210ENST00000478169 ABLIM1O14639 778 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 ZNF263O14978 683 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 MOSPD3O75425 235 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 RETP07949 1114 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 CHRNB1P11230 501 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 MCM4P33991 863 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 CNR2P34972 360 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 VIPR2P41587 438 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 NEK4P51957 841 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 TWF1Q12792 350 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 TTC38Q5R3I4 469 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 MPZL3Q6UWV2 235 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 TAS1R3Q7RTX0 852 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 HS6ST3Q8IZP7 471 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 SPEM1Q8N4L4 309 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 C4orf32Q8N8J7 132 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 BEST2Q8NFU1 509 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 ZSCAN18Q8TBC5 510 aaPredicted RBP10.55□□□□□ -0.72
CCM2-210ENST00000478169 NETO1Q8TDF5 533 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 DDX12PQ92771 950 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 C18orf25Q96B23 403 aaPredicted RBP10.55□□□□□ -0.72
CCM2-210ENST00000478169 C8orf76Q96K31 380 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 DRC1Q96MC2 740 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 TBC1D32Q96NH3 1257 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 NTPCRQ9BSD7 190 aaKnown RBP10.55□□□□□ -0.72
CCM2-210ENST00000478169 TARS2Q9BW92 718 aaKnown RBP10.55□□□□□ -0.72
CCM2-210ENST00000478169 RAB34Q9BZG1 259 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 KMT5AQ9NQR1 393 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 DDX19AQ9NUU7 478 aaKnown RBP10.55□□□□□ -0.72
CCM2-210ENST00000478169 CEP72Q9P209 647 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 PCDHB8Q9UN66 801 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 DNM3Q9UQ16 869 aa10.55□□□□□ -0.72
CCM2-210ENST00000478169 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms