RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 PZPP20742 1482 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 CD109Q6YHK3 1445 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 SCAPERQ9BY12 1400 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 CNTLNQ9NXG0 1405 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 GOLGA8AA7E2F4 631 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 MTHFD2P13995 350 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 IL2RBP14784 551 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 GUCY1A2P33402 732 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 HNRNPA0Q13151 305 aaKnown RBP5.84□□□□□ -1.47
LMBR1-216ENST00000477983 MPP3Q13368 585 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 STAT4Q14765 748 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 CT47A1Q5JQC4 288 aaPredicted RBP5.84□□□□□ -1.47
LMBR1-216ENST00000477983 TSHZ3Q63HK5 1081 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 OTUD7BQ6GQQ9 843 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 FBXO42Q6P3S6 717 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 MED25Q71SY5 747 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 GPR149Q86SP6 731 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 MRI1Q9BV20 369 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 QRSL1Q9H0R6 528 aaKnown RBP5.84□□□□□ -1.47
LMBR1-216ENST00000477983 IFT122Q9HBG6 1241 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 VTA1Q9NP79 307 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 RBM12Q9NTZ6 932 aaKnown RBP5.84□□□□□ -1.47
LMBR1-216ENST00000477983 MOCS1Q9NZB8 636 aa5.84□□□□□ -1.47
LMBR1-216ENST00000477983 ADGRL1O94910 1474 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 ANKRD30BQ9BXX2 1392 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 ITGAMP11215 1152 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 GCSHP23434 173 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 ECHS1P30084 290 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 CXCR5P32302 372 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 SCAND1P57086 179 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 CCT2P78371 535 aaKnown RBP5.83□□□□□ -1.48
LMBR1-216ENST00000477983 PPP3CAQ08209 521 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 UBXN2BQ14CS0 331 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 SPDYE7PQ495Y7 208 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 MUM1L1Q5H9M0 696 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 AFMIDQ63HM1 303 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 RD3Q7Z3Z2 195 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 FAM43AQ8N2R8 423 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 FUBP3Q96I24 572 aaKnown RBP eCLIP5.83□□□□□ -1.48
LMBR1-216ENST00000477983 PLXNC1O60486 1568 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 DUOX2Q9NRD8 1548 aa5.83□□□□□ -1.48
LMBR1-216ENST00000477983 ROCK2O75116 1388 aaKnown RBP5.82□□□□□ -1.48
LMBR1-216ENST00000477983 POLR2AP24928 1970 aaKnown RBP5.82□□□□□ -1.48
LMBR1-216ENST00000477983 A0A1B0GTW7 788 aa5.82□□□□□ -1.48
LMBR1-216ENST00000477983 EYA4O95677 639 aa5.82□□□□□ -1.48
LMBR1-216ENST00000477983 POMCP01189 267 aa5.82□□□□□ -1.48
LMBR1-216ENST00000477983 TMPRSS15P98073 1019 aa5.82□□□□□ -1.48
LMBR1-216ENST00000477983 FAPQ12884 760 aa5.82□□□□□ -1.48
LMBR1-216ENST00000477983 PQLC1Q8N2U9 271 aa5.82□□□□□ -1.48
LMBR1-216ENST00000477983 PHACTR3Q96KR7 559 aa5.82□□□□□ -1.48
LMBR1-216ENST00000477983 ALOXE3Q9BYJ1 711 aa5.82□□□□□ -1.48
LMBR1-216ENST00000477983 REXO4Q9GZR2 422 aaKnown RBP5.82□□□□□ -1.48
LMBR1-216ENST00000477983 ADARB2Q9NS39 739 aaKnown RBP5.82□□□□□ -1.48
LMBR1-216ENST00000477983 NOX1Q9Y5S8 564 aa5.82□□□□□ -1.48
LMBR1-216ENST00000477983 RTEL1-TNFRSF6BF6WH68 1400 aa5.82□□□□□ -1.48
LMBR1-216ENST00000477983 RNF123Q5XPI4 1314 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 SALL3Q9BXA9 1300 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 ZFYVE16Q7Z3T8 1539 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 CPEP16870 476 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 FDXRP22570 491 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 PLA2G5P39877 138 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 ELLP55199 621 aaPredicted RBP5.81□□□□□ -1.48
LMBR1-216ENST00000477983 RAP2BP61225 183 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 OCA2Q04671 838 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 LRCH2Q5VUJ6 765 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 LHFPL2Q6ZUX7 228 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 CAGE1Q8TC20 777 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 CASKIN2Q8WXE0 1202 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 NELL1Q92832 810 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 Q96MF0 132 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 ACE2Q9BYF1 805 aaPredicted RBP5.81□□□□□ -1.48
LMBR1-216ENST00000477983 RNPEPQ9H4A4 650 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 PRKRIP1Q9H875 184 aaPredicted RBP5.81□□□□□ -1.48
LMBR1-216ENST00000477983 SMG6Q86US8 1419 aaKnown RBP5.81□□□□□ -1.48
LMBR1-216ENST00000477983 ERBINQ96RT1 1412 aa5.81□□□□□ -1.48
LMBR1-216ENST00000477983 INSRP06213 1382 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 CFAP74Q9C0B2 1584 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 ATP7AQ04656 1500 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 KDM5DQ9BY66 1539 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 FAM135AQ9P2D6 1515 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 RPRD2Q5VT52 1461 aaKnown RBP5.8□□□□□ -1.48
LMBR1-216ENST00000477983 ZNF37AP17032 561 aaPredicted RBP5.8□□□□□ -1.48
LMBR1-216ENST00000477983 ATP5JP18859 108 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 MCAMP43121 646 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 PER3P56645 1201 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 SRSF2Q01130 221 aaKnown RBP5.8□□□□□ -1.48
LMBR1-216ENST00000477983 ZNF169Q14929 603 aaPredicted RBP5.8□□□□□ -1.48
LMBR1-216ENST00000477983 TOR2AQ5JU69 321 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 ZNF362Q5T0B9 420 aaPredicted RBP5.8□□□□□ -1.48
LMBR1-216ENST00000477983 SEM1Q6ZVN7 128 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 KRT26Q7Z3Y9 468 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 FBXO18Q8NFZ0 1043 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 UHRF1Q96T88 793 aaPredicted RBP5.8□□□□□ -1.48
LMBR1-216ENST00000477983 GALNT9Q9HCQ5 603 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 LANCL2Q9NS86 450 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 C14orf119Q9NWQ9 140 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 SIK3Q9Y2K2 1263 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 UNC13BO14795 1591 aa5.8□□□□□ -1.48
LMBR1-216ENST00000477983 SPATA31A6Q5VVP1 1343 aa5.79□□□□□ -1.48
LMBR1-216ENST00000477983 WASHC2AQ641Q2 1341 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms