RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 LINC00301Q8NCQ3 95 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 LNX1Q8TBB1 728 aaPredicted RBP9.03□□□□□ -0.96
ERCC8-205ENST00000477893 SMG7Q92540 1137 aaKnown RBP9.03□□□□□ -0.96
ERCC8-205ENST00000477893 DHX58Q96C10 678 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 CHAMP1Q96JM3 812 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 UROC1Q96N76 676 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 NTPCRQ9BSD7 190 aaKnown RBP9.03□□□□□ -0.96
ERCC8-205ENST00000477893 MRPL44Q9H9J2 332 aaKnown RBP9.03□□□□□ -0.96
ERCC8-205ENST00000477893 PIDD1Q9HB75 910 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 RXFP1Q9HBX9 757 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.03□□□□□ -0.96
ERCC8-205ENST00000477893 SLC38A7Q9NVC3 462 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 CNTN3Q9P232 1028 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 KCNG1Q9UIX4 513 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 POLIQ9UNA4 740 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 CDY1Q9Y6F8 540 aa9.03□□□□□ -0.96
ERCC8-205ENST00000477893 MYH15Q9Y2K3 1946 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 LACTBL1A8MY62 500 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 CCL16O15467 120 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 GCNT3O95395 438 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 BRD1O95696 1058 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 CLTAP09496 248 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 KCNE1P15382 129 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 GBP2P32456 591 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-205ENST00000477893 OR1D2P34982 312 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 ME1P48163 572 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 ACOT2P49753 483 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 ELAVL2Q12926 359 aaKnown RBP9.02□□□□□ -0.97
ERCC8-205ENST00000477893 ENOX2Q16206 610 aaKnown RBP9.02□□□□□ -0.97
ERCC8-205ENST00000477893 ADALQ6DHV7 355 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 CD300LGQ6UXG3 332 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 ALKAL1Q6UXT8 129 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 RSPO2Q6UXX9 243 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-205ENST00000477893 GET4Q7L5D6 327 aaPredicted RBP9.02□□□□□ -0.97
ERCC8-205ENST00000477893 MAP4K3Q8IVH8 894 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 KREMEN2Q8NCW0 462 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 SLC7A14Q8TBB6 771 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 PIK3R5Q8WYR1 880 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 HPS3Q969F9 1004 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 FIZ1Q96SL8 496 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 CLSTN3Q9BQT9 956 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 FGFBP2Q9BYJ0 223 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 RPF1Q9H9Y2 349 aaKnown RBP9.02□□□□□ -0.97
ERCC8-205ENST00000477893 LIMD1Q9UGP4 676 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 HCN4Q9Y3Q4 1203 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 CLUHO75153 1309 aa9.02□□□□□ -0.97
ERCC8-205ENST00000477893 PPEF2O14830 753 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 OGTO15294 1046 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 TRAPPC3O43617 180 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 GPR37L1O60883 481 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 C8AP07357 584 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 NFICP08651 508 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 FGFR3P22607 806 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 CASP1P29466 404 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 CDR1P51861 262 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 CASP5P51878 434 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 ASIC1P78348 528 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 NTHL1P78549 312 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 ZXDAP98168 799 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 DNM1Q05193 864 aaKnown RBP9.01□□□□□ -0.97
ERCC8-205ENST00000477893 KCNA1Q09470 495 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 PTPN21Q16825 1174 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 XKR4Q5GH76 650 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 PPM1LQ5SGD2 360 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 JADE1Q6IE81 842 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 SHC4Q6S5L8 630 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 HFE2Q6ZVN8 426 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 SYCP3Q8IZU3 236 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 POMGNT1Q8WZA1 660 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 EDAQ92838 391 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 ZNF707Q96C28 371 aaPredicted RBP9.01□□□□□ -0.97
ERCC8-205ENST00000477893 DNAJC19Q96DA6 116 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 SAAL1Q96ER3 474 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 PANK4Q9NVE7 773 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 FNIP2Q9P278 1114 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 DPP7Q9UHL4 492 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 FBXW11Q9UKB1 542 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 TIMM13Q9Y5L4 95 aaPredicted RBP9.01□□□□□ -0.97
ERCC8-205ENST00000477893 TRIOO75962 3097 aa9.01□□□□□ -0.97
ERCC8-205ENST00000477893 A0A0B4J269 797 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 GOLGA8IPA6NC78 632 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 TMEM221A6NGB7 291 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 GOLGA8JA6NMD2 632 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 PRR33A8MZF0 331 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 TMEM189-UBE2V1I3L0A0 370 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 M0R296 226 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 POLR2DO15514 142 aaKnown RBP9□□□□□ -0.97
ERCC8-205ENST00000477893 FAM189A1O60320 539 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 CUTAO60888 179 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 PPP6R2O75170 966 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 PRPF6O94906 941 aaKnown RBP9□□□□□ -0.97
ERCC8-205ENST00000477893 YEATS4O95619 227 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 PIGRP01833 764 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 GAP43P17677 238 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 PRR20EP86478 221 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 PRR20CP86479 221 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 PRR20DP86480 221 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 PRR20BP86481 221 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 PRR20AP86496 221 aa9□□□□□ -0.97
ERCC8-205ENST00000477893 GTF2BQ00403 316 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms