RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 CTDNEP1O95476 244 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 SEC24AO95486 1093 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 RETP07949 1114 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 ADRB1P08588 477 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 SPATA31C1P0DKV0 1188 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 XRCC6P12956 609 aaKnown RBP eCLIP7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 ATF2P15336 505 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 CYP11B2P19099 503 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 FCARP24071 287 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 MARCKSP29966 332 aaPredicted RBP7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 CCT6AP40227 531 aaKnown RBP7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 CCR2P41597 374 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 CXCL12P48061 93 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 SOX9P48436 509 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 EFNA5P52803 228 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 GUCY1B3Q02153 619 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 DMWDQ09019 674 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 FZD5Q13467 585 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 LRRC32Q14392 662 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 SAFBQ15424 915 aaKnown RBP eCLIP7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 TEAD2Q15562 447 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 AASDHQ4L235 1098 aaPredicted RBP7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 PRSS36Q5K4E3 855 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 IL31Q6EBC2 164 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 ZNF280DQ6N043 979 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 PRR23CQ6ZRP0 262 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 RTL10Q7L3V2 364 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 CELF5Q8N6W0 485 aaKnown RBP7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 CEP120Q8N960 986 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 C12orf50Q8NA57 414 aaPredicted RBP7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 SMARCD2Q92925 531 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 ZSWIM3Q96MP5 696 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 ASB16Q96NS5 453 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 PGLYRP2Q96PD5 576 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 CCDC113Q9H0I3 377 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 TMEM60Q9H2L4 133 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 BHMT2Q9H2M3 363 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 SEMA4GQ9NTN9 838 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 RBM12Q9NTZ6 932 aaKnown RBP7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 SLC38A7Q9NVC3 462 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 ANKFY1Q9P2R3 1169 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 FBXL5Q9UKA1 691 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 OBSL1O75147 1896 aa7.32□□□□□ -1.24
RTFDC1-206ENST00000477485 PHLPP2Q6ZVD8 1323 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 F5P12259 2224 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 A0A1W2PRU2 124 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 ARHGEF37A1IGU5 675 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 HEPACAM2A8MVW5 462 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 NRG2O14511 850 aaPredicted RBP7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 DPYSL4O14531 572 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 SLC30A4O14863 429 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 GDF9O60383 454 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 OR52Z1P0C646 297 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 PEX3P56589 373 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 SOX4Q06945 474 aaPredicted RBP7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 ANKRD1Q15327 319 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 ZNF174Q15697 407 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 CCDC6Q16204 474 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 NT5DC1Q5TFE4 455 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 HAUS3Q68CZ6 603 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 SLC8B1Q6J4K2 584 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 POTEHQ6S545 545 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 TCEAL8Q8IYN2 117 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 DEPDC1BQ8WUY9 529 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 NELL1Q92832 810 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 KIFAP3Q92845 792 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 TNFRSF25Q93038 417 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 C18orf25Q96B23 403 aaPredicted RBP7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 ACAP3Q96P50 834 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 MTMR9Q96QG7 549 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 IER2Q9BTL4 223 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 POLR3CQ9BUI4 534 aaPredicted RBP7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 CDT1Q9H211 546 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 AVENQ9NQS1 362 aaPredicted RBP7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 CEP72Q9P209 647 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 MYO16Q9Y6X6 1858 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 CHD8Q9HCK8 2581 aa7.31□□□□□ -1.24
RTFDC1-206ENST00000477485 SDK1Q7Z5N4 2213 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 SHISA7A6NL88 538 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 TULP1O00294 542 aaPredicted RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 SYN3O14994 580 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 AXIN1O15169 862 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 HRO43593 1189 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 JAK2O60674 1132 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 LRP3O75074 770 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 ABLIM3O94929 683 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 LARGE1O95461 756 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 OR4Q2P0C623 313 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 CCDC192P0DO97 292 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 CHRNB1P11230 501 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 FDPSP14324 419 aaKnown RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 TGM1P22735 817 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 RPA1P27694 616 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 GRM5P41594 1212 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 CDR1P51861 262 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 SPAG1Q07617 926 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 STRN3Q13033 797 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 DMP1Q13316 513 aaPredicted RBP7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 PLD1Q13393 1074 aa7.3□□□□□ -1.24
RTFDC1-206ENST00000477485 PON2Q15165 354 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms