RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 RTP2Q5QGT7 225 aa19.25■□□□□ 0.67
SMIM4-202ENST00000476842 CEP57Q86XR8 500 aa19.25■□□□□ 0.67
SMIM4-202ENST00000476842 WDR49Q8IV35 697 aa19.25■□□□□ 0.67
SMIM4-202ENST00000476842 RIN2Q8WYP3 895 aaPredicted RBP19.25■□□□□ 0.67
SMIM4-202ENST00000476842 PIK3R5Q8WYR1 880 aa19.25■□□□□ 0.67
SMIM4-202ENST00000476842 SUSD3Q96L08 255 aa19.25■□□□□ 0.67
SMIM4-202ENST00000476842 FNBP1Q96RU3 617 aa19.25■□□□□ 0.67
SMIM4-202ENST00000476842 NUP62CLQ9H1M0 184 aa19.25■□□□□ 0.67
SMIM4-202ENST00000476842 PRDM6Q9NQX0 595 aa19.25■□□□□ 0.67
SMIM4-202ENST00000476842 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMIM4-202ENST00000476842 FNIP2Q9P278 1114 aa19.25■□□□□ 0.67
SMIM4-202ENST00000476842 FRMD4BQ9Y2L6 1034 aa19.25■□□□□ 0.67
SMIM4-202ENST00000476842 I3L4J1 428 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 PPEF2O14830 753 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 SYN3O14994 580 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 CD44P16070 742 aaKnown RBP19.24■□□□□ 0.67
SMIM4-202ENST00000476842 MCM4P33991 863 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 LILRA4P59901 499 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 KCNC3Q14003 757 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 PDXDC1Q6P996 788 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 TMEM184AQ6ZMB5 413 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 C1orf127Q8N9H9 656 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 LNX1Q8TBB1 728 aaPredicted RBP19.24■□□□□ 0.67
SMIM4-202ENST00000476842 PARD3BQ8TEW8 1205 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 CCDC127Q96BQ5 260 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 ANKRD36BP1Q96IX9 119 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 TSG101Q99816 390 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 GZF1Q9H116 711 aaPredicted RBP19.24■□□□□ 0.67
SMIM4-202ENST00000476842 UBE2ZQ9H832 354 aaPredicted RBP19.24■□□□□ 0.67
SMIM4-202ENST00000476842 CLDND1Q9NY35 253 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 ITGA11Q9UKX5 1188 aa19.24■□□□□ 0.67
SMIM4-202ENST00000476842 EYSQ5T1H1 3165 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 M0QZQ0 153 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 PSMA7O14818 248 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 LINC01565O15544 149 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 TNNC2P02585 160 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 TMEM191BP0C7N4 346 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 DLATP10515 647 aaKnown RBP19.23■□□□□ 0.67
SMIM4-202ENST00000476842 CCNE1P24864 410 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 KLRC2P26717 231 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 TKTP29401 623 aaKnown RBP19.23■□□□□ 0.67
SMIM4-202ENST00000476842 PSMC2P35998 433 aaKnown RBP19.23■□□□□ 0.67
SMIM4-202ENST00000476842 LTBRP36941 435 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 CREMQ03060 361 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 LRRC63Q05C16 580 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 CEP135Q66GS9 1140 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 LMBRD2Q68DH5 695 aaPredicted RBP19.23■□□□□ 0.67
SMIM4-202ENST00000476842 ANKRD40Q6AI12 368 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 PPFIBP1Q86W92 1011 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 CSGALNACT2Q8N6G5 542 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 OR5B17Q8NGF7 314 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 CXorf38Q8TB03 319 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 POP1Q99575 1024 aaKnown RBP19.23■□□□□ 0.67
SMIM4-202ENST00000476842 CGRRF1Q99675 332 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 PCDHB8Q9UN66 801 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 CITO14578 2027 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 PTPRJQ12913 1337 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 MYO7AQ13402 2215 aa19.23■□□□□ 0.67
SMIM4-202ENST00000476842 CETN3O15182 167 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 SPTLC1O15269 473 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 TEX28O15482 410 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 AKAP3O75969 853 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 MBD3O95983 291 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 C1RP00736 705 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 ITGB3P05106 788 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 TNNI1P19237 187 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 PMS1P54277 932 aaKnown RBP19.22■□□□□ 0.67
SMIM4-202ENST00000476842 MCCD1P59942 119 aaPredicted RBP19.22■□□□□ 0.67
SMIM4-202ENST00000476842 CLDN10P78369 228 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 RBP5P82980 135 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 MRPL58Q14197 206 aaKnown RBP19.22■□□□□ 0.67
SMIM4-202ENST00000476842 FOXR2Q6PJQ5 311 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 PRSS55Q6UWB4 352 aaPredicted RBP19.22■□□□□ 0.67
SMIM4-202ENST00000476842 DSTYKQ6XUX3 929 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 ANKS3Q6ZW76 656 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 APPL2Q8NEU8 664 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 VN1R2Q8NFZ6 395 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 PLEKHO2Q8TD55 490 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 TMC2Q8TDI7 906 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 SLC22A17Q8WUG5 538 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 ZNF516Q92618 1163 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 MTMR12Q9C0I1 747 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 AGAP1Q9UPQ3 857 aa19.22■□□□□ 0.67
SMIM4-202ENST00000476842 TRIP11Q15643 1979 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 GLP2RO95838 553 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 ADH1AP07327 375 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 POLR2BP30876 1174 aaKnown RBP19.21■□□□□ 0.67
SMIM4-202ENST00000476842 PNPLA4P41247 253 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 TAF6P49848 677 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 AP3M2P53677 418 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 FKBP3Q00688 224 aaKnown RBP19.21■□□□□ 0.67
SMIM4-202ENST00000476842 PSMD5Q16401 504 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 TRAPPC11Q7Z392 1133 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 ZC3H3Q8IXZ2 948 aaKnown RBP19.21■□□□□ 0.67
SMIM4-202ENST00000476842 LRRC52Q8N7C0 313 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 ATXN2LQ8WWM7 1075 aaKnown RBP19.21■□□□□ 0.67
SMIM4-202ENST00000476842 BORCS6Q96GS4 357 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 FAM84AQ96KN4 292 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 SENP8Q96LD8 212 aa19.21■□□□□ 0.67
SMIM4-202ENST00000476842 CLSTN3Q9BQT9 956 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms