RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 MON1BQ7L1V2 547 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 DHX37Q8IY37 1157 aaKnown RBP17.75■□□□□ 0.43
TVP23B-202ENST00000476139 RBBP8NLQ8NC74 664 aaPredicted RBP17.75■□□□□ 0.43
TVP23B-202ENST00000476139 FBXO41Q8TF61 875 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 ACO2Q99798 780 aaKnown RBP17.75■□□□□ 0.43
TVP23B-202ENST00000476139 CCDC113Q9H0I3 377 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 PCYOX1Q9UHG3 505 aa17.75■□□□□ 0.43
TVP23B-202ENST00000476139 LOC285556D6RIA3 1793 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 CXCL11O14625 94 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 CSDE1O75534 798 aaKnown RBP17.74■□□□□ 0.43
TVP23B-202ENST00000476139 CD58P19256 250 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 BPIFB4P59827 614 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 SNX1Q13596 522 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 KCTD2Q14681 263 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 GJC2Q5T442 439 aaPredicted RBP17.74■□□□□ 0.43
TVP23B-202ENST00000476139 UBAP2Q5T6F2 1119 aaKnown RBP17.74■□□□□ 0.43
TVP23B-202ENST00000476139 ZDHHC24Q6UX98 284 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 ABRAQ8N0Z2 381 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 NLRP4Q96MN2 994 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 GRHL1Q9NZI5 618 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 NOVA2Q9UNW9 492 aaKnown RBP17.74■□□□□ 0.43
TVP23B-202ENST00000476139 FAM187AA6NFU0 413 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 E7EVH7 732 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 B4GALT5O43286 388 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 THAP12O43422 761 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 MYL6P60660 151 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 PLCB4Q15147 1175 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 IER5Q5VY09 327 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 ZPBP2Q6X784 338 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 ZNF677Q86XU0 584 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 THNSL1Q8IYQ7 743 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 CEP120Q8N960 986 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 FAM81BQ96LP2 452 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 MMP19Q99542 508 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 MRPL4Q9BYD3 311 aaKnown RBP17.74■□□□□ 0.43
TVP23B-202ENST00000476139 PAPPA2Q9BXP8 1791 aa17.74■□□□□ 0.43
TVP23B-202ENST00000476139 DNAJC25-GNG10A0A024R161 153 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 SMIM23A6NLE4 172 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 SLC25A27O95847 323 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 CYP2C8P10632 490 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 COILP38432 576 aaPredicted RBP17.73■□□□□ 0.43
TVP23B-202ENST00000476139 NOMO3P69849 1222 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 CLUL1Q15846 466 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 MMS22LQ6ZRQ5 1243 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 RNPEPQ9H4A4 650 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 ADAM22Q9P0K1 906 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 OTOFQ9HC10 1997 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 PRKCBP05771 671 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 TXNP10599 105 aaKnown RBP17.73■□□□□ 0.43
TVP23B-202ENST00000476139 MDH1P40925 334 aaKnown RBP17.73■□□□□ 0.43
TVP23B-202ENST00000476139 MAPK6Q16659 721 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 CHADLQ6NUI6 762 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 BRSK2Q8IWQ3 736 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 ZNF606Q8WXB4 792 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 ATG4AQ8WYN0 398 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 TXLNGYQ9BZA5 131 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 IQCF3P0C7M6 154 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 CLCN3P51790 818 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 EFNA5P52803 228 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 MAMLD1Q13495 774 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 CCDC62Q6P9F0 684 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 LRIG3Q6UXM1 1119 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 PPP1R16BQ96T49 567 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 HEMGNQ9BXL5 484 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 MINDY3Q9H8M7 445 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 MTUS1Q9ULD2 1270 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 KCNH4Q9UQ05 1017 aa17.73■□□□□ 0.43
TVP23B-202ENST00000476139 ABLIM1O14639 778 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 PPFIA2O75334 1257 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 SHBGP04278 402 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 WEE2P0C1S8 567 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 HSPA6P17066 643 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 TFAMQ00059 246 aaKnown RBP17.72■□□□□ 0.43
TVP23B-202ENST00000476139 KRT71Q3SY84 523 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 C9orf131Q5VYM1 1079 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 GPAT2Q6NUI2 795 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 EPB41L4BQ9H329 900 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 AVENQ9NQS1 362 aaPredicted RBP17.72■□□□□ 0.43
TVP23B-202ENST00000476139 CHST7Q9NS84 486 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 SBF1O95248 1867 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 HMGB1P1B2RPK0 211 aaPredicted RBP17.72■□□□□ 0.43
TVP23B-202ENST00000476139 INO80B-WBP1J3KQ70 363 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 ASS1P00966 412 aaKnown RBP17.72■□□□□ 0.43
TVP23B-202ENST00000476139 IGBP1P78318 339 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 PTGISQ16647 500 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 CYP1B1Q16678 543 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 CDCA2Q69YH5 1023 aaPredicted RBP17.72■□□□□ 0.43
TVP23B-202ENST00000476139 TMEM192Q8IY95 271 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 FAM118BQ9BPY3 351 aa17.72■□□□□ 0.43
TVP23B-202ENST00000476139 INO80BQ9C086 356 aaPredicted RBP17.72■□□□□ 0.43
TVP23B-202ENST00000476139 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.72■□□□□ 0.43
TVP23B-202ENST00000476139 IGKV6-21A0A0C4DH24 114 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 TLDC2A0PJX2 215 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 LGR5O75473 907 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 DRG2P55039 364 aaKnown RBP17.71■□□□□ 0.43
TVP23B-202ENST00000476139 IFFO1Q0D2I5 559 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 MXD4Q14582 209 aaPredicted RBP17.71■□□□□ 0.43
TVP23B-202ENST00000476139 EFCAB12Q6NXP0 572 aa17.71■□□□□ 0.43
TVP23B-202ENST00000476139 FAM167AQ96KS9 214 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms