RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 MCL1Q07820 350 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 ELAVL2Q12926 359 aaKnown RBP16.99■□□□□ 0.31
CPSF3-203ENST00000475482 STRN3Q13033 797 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 GLRA4Q5JXX5 417 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 TMC5Q6UXY8 1006 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 CYP26C1Q6V0L0 522 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 HAUS6Q7Z4H7 955 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 DHX40Q8IX18 779 aaKnown RBP16.99■□□□□ 0.31
CPSF3-203ENST00000475482 LNX1Q8TBB1 728 aaPredicted RBP16.99■□□□□ 0.31
CPSF3-203ENST00000475482 ENOX1Q8TC92 643 aaKnown RBP16.99■□□□□ 0.31
CPSF3-203ENST00000475482 RIN2Q8WYP3 895 aaPredicted RBP16.99■□□□□ 0.31
CPSF3-203ENST00000475482 DNAJC19Q96DA6 116 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 DHTKD1Q96HY7 919 aaPredicted RBP16.99■□□□□ 0.31
CPSF3-203ENST00000475482 UROC1Q96N76 676 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 ZMAT2Q96NC0 199 aaKnown RBP16.99■□□□□ 0.31
CPSF3-203ENST00000475482 ACAP3Q96P50 834 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 TTPALQ9BTX7 342 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 HAPLN2Q9GZV7 340 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 PLEKHA4Q9H4M7 779 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 MAN1C1Q9NR34 630 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 DPP7Q9UHL4 492 aa16.99■□□□□ 0.31
CPSF3-203ENST00000475482 MUC6Q6W4X9 2439 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 BICDL2A1A5D9 508 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 C2CD4DB7Z1M9 353 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 TGM5O43548 720 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 PIGRP01833 764 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 FGFR3P22607 806 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 CLCNKBP51801 687 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 YARSP54577 528 aaKnown RBP16.98■□□□□ 0.31
CPSF3-203ENST00000475482 ZXDAP98168 799 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 PAK1Q13153 545 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 BMP8AQ7Z5Y6 402 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 ZBTB33Q86T24 672 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 ZDHHC14Q8IZN3 488 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 C3orf58Q8NDZ4 430 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 HASPINQ8TF76 798 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 CLSTN3Q9BQT9 956 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 TCHPQ9BT92 498 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 PARVGQ9HBI0 331 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 SEL1LQ9UBV2 794 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 RWDD2AQ9UIY3 292 aa16.98■□□□□ 0.31
CPSF3-203ENST00000475482 FRMD3A2A2Y4 597 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 PPP1R3GB7ZBB8 358 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 FAM189A1O60320 539 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 FAM13AO94988 1023 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 OSTNP61366 133 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 NOLC1Q14978 699 aaKnown RBP eCLIP16.97■□□□□ 0.31
CPSF3-203ENST00000475482 PTPN21Q16825 1174 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 TPD52L1Q16890 204 aaPredicted RBP16.97■□□□□ 0.31
CPSF3-203ENST00000475482 SLC10A6Q3KNW5 377 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 FAM26FQ5R3K3 315 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 FAM171A1Q5VUB5 890 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 PRSS55Q6UWB4 352 aaPredicted RBP16.97■□□□□ 0.31
CPSF3-203ENST00000475482 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.97■□□□□ 0.31
CPSF3-203ENST00000475482 STXBP4Q6ZWJ1 553 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 ADSSL1Q8N142 457 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 ZNF707Q96C28 371 aaPredicted RBP16.97■□□□□ 0.31
CPSF3-203ENST00000475482 DDX27Q96GQ7 796 aaKnown RBP16.97■□□□□ 0.31
CPSF3-203ENST00000475482 ST6GALNAC4Q9H4F1 302 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 ZHX3Q9H4I2 956 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 GOLGA2P5Q9HBQ8 144 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 SLC38A7Q9NVC3 462 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 TBX20Q9UMR3 447 aa16.97■□□□□ 0.31
CPSF3-203ENST00000475482 CLDN3O15551 220 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 B3GAT3O94766 335 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 ADRB2P07550 413 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 RPL17P18621 184 aaKnown RBP16.96■□□□□ 0.31
CPSF3-203ENST00000475482 PRCPP42785 496 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 GTF2BQ00403 316 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 PLCB2Q00722 1185 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 EHHADHQ08426 723 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 SPATA1Q5VX52 437 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 KLHL10Q6JEL2 608 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 PDXDC1Q6P996 788 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 TRIM67Q6ZTA4 783 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 PALB2Q86YC2 1186 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 GUF1Q8N442 669 aaKnown RBP16.96■□□□□ 0.31
CPSF3-203ENST00000475482 MYCT1Q8N699 235 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 PLEKHA5Q9HAU0 1116 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 ZDHHC7Q9NXF8 308 aa16.96■□□□□ 0.31
CPSF3-203ENST00000475482 CCDC195A0A1B0GUA6 201 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 RFPL2O75678 378 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 RPL9P32969 192 aaKnown RBP16.95■□□□□ 0.3
CPSF3-203ENST00000475482 ABCD1P33897 745 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 SIGLEC14Q08ET2 396 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 ZBTB6Q15916 424 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 PSMD5Q16401 504 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 ELMSAN1Q6PJG2 1045 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 HFE2Q6ZVN8 426 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 SMYD4Q8IYR2 804 aaPredicted RBP16.95■□□□□ 0.3
CPSF3-203ENST00000475482 PLCD3Q8N3E9 789 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 NELFBQ8WX92 580 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 ASIC4Q96FT7 647 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 WDR6Q9NNW5 1121 aaKnown RBP16.95■□□□□ 0.3
CPSF3-203ENST00000475482 OLFML3Q9NRN5 406 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 ANKFY1Q9P2R3 1169 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 FBXW11Q9UKB1 542 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 CTNND2Q9UQB3 1225 aa16.95■□□□□ 0.3
CPSF3-203ENST00000475482 TTC26A0AVF1 554 aa16.94■□□□□ 0.3
CPSF3-203ENST00000475482 ADAM12O43184 909 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms