RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 DNAI1Q9UI46 699 aa14.74□□□□□ -0.05
TRAF4-210ENST00000475329 SIX4Q9UIU6 781 aa14.74□□□□□ -0.05
TRAF4-210ENST00000475329 NAGPAQ9UK23 515 aa14.74□□□□□ -0.05
TRAF4-210ENST00000475329 NENFQ9UMX5 172 aa14.74□□□□□ -0.05
TRAF4-210ENST00000475329 GUCA1BQ9UMX6 200 aa14.74□□□□□ -0.05
TRAF4-210ENST00000475329 HES2Q9Y543 173 aa14.74□□□□□ -0.05
TRAF4-210ENST00000475329 IPPQ9Y573 584 aa14.74□□□□□ -0.05
TRAF4-210ENST00000475329 SCN1AP35498 2009 aa14.74□□□□□ -0.05
TRAF4-210ENST00000475329 DDX3XO00571 662 aaKnown RBP eCLIP14.73□□□□□ -0.059e-11■■■■□ 24
TRAF4-210ENST00000475329 SGPL1O95470 568 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 HSPA8P11142 646 aaKnown RBP14.73□□□□□ -0.05
TRAF4-210ENST00000475329 MTFR1Q15390 333 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 ZNF667Q5HYK9 610 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 ALKBH5Q6P6C2 394 aaKnown RBP14.73□□□□□ -0.05
TRAF4-210ENST00000475329 GLYCTKQ8IVS8 523 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 USP38Q8NB14 1042 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 BEST2Q8NFU1 509 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 SLC30A5Q8TAD4 765 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 U2AF1L4Q8WU68 220 aaKnown RBP14.73□□□□□ -0.05
TRAF4-210ENST00000475329 SLC20A1Q8WUM9 679 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 FAXDC2Q96IV6 333 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 RNF208Q9H0X6 261 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 TRPV6Q9H1D0 765 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 SEPT11Q9NVA2 429 aaKnown RBP14.73□□□□□ -0.05
TRAF4-210ENST00000475329 PARP2Q9UGN5 583 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 NOCTQ9UK39 431 aaKnown RBP14.73□□□□□ -0.05
TRAF4-210ENST00000475329 OGDHLQ9ULD0 1010 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 TFR2Q9UP52 801 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 PAXBP1Q9Y5B6 917 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 PCDHB4Q9Y5E5 795 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 SQORQ9Y6N5 450 aa14.73□□□□□ -0.05
TRAF4-210ENST00000475329 XPOTO43592 962 aaKnown RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 ABL1P00519 1130 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 MYCP01106 439 aaPredicted RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 GHRP10912 638 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 CKBP12277 381 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 P4HA1P13674 534 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 CYP11B1P15538 503 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 ZSCAN20P17040 1043 aaPredicted RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 ACO1P21399 889 aaKnown RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 AKAP5P24588 427 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 POLR2BP30876 1174 aaKnown RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 CASQ1P31415 396 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 RBP5P82980 135 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 LPIN1Q14693 890 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 ZNF569Q5MCW4 686 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 ZNF618Q5T7W0 954 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 SCARA3Q6AZY7 606 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 ALKAL1Q6UXT8 129 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 NOP9Q86U38 636 aaKnown RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 SLC47A2Q86VL8 602 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 RPUSD2Q8IZ73 545 aaKnown RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 UBR7Q8N806 425 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 SMG8Q8ND04 991 aaKnown RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 CXorf38Q8TB03 319 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 SECISBP2LQ93073 1101 aaKnown RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 WDR24Q96S15 920 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 VRTNQ9H8Y1 702 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 AGO3Q9H9G7 860 aaKnown RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 FAM105AQ9NUU6 356 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 INTUQ9ULD6 942 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 PADI3Q9ULW8 664 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 UBQLN1Q9UMX0 589 aaKnown RBP14.72□□□□□ -0.05
TRAF4-210ENST00000475329 AGAP1Q9UPQ3 857 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 CNTN6Q9UQ52 1028 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 PCDHB2Q9Y5E7 798 aa14.72□□□□□ -0.05
TRAF4-210ENST00000475329 MACROD2A1Z1Q3 448 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 STAU1O95793 577 aaKnown RBP14.71□□□□□ -0.05
TRAF4-210ENST00000475329 H2AFZP0C0S5 128 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 KCNE1P15382 129 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 CD52P31358 61 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 ASPAP45381 313 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 RAB27AP51159 221 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 GUCY2FP51841 1108 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 CDR2Q01850 454 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 ZBTB6Q15916 424 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 XKR4Q5GH76 650 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 TAF3Q5VWG9 929 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 TMEM270Q6UE05 265 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 SCARA5Q6ZMJ2 495 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 H2AFVQ71UI9 128 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 CTU1Q7Z7A3 348 aaKnown RBP14.71□□□□□ -0.05
TRAF4-210ENST00000475329 ZNF677Q86XU0 584 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 SLC35F6Q8N357 371 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 RBBP8NLQ8NC74 664 aaPredicted RBP14.71□□□□□ -0.05
TRAF4-210ENST00000475329 CAGE1Q8TC20 777 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 HPDLQ96IR7 371 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 ZMAT2Q96NC0 199 aaKnown RBP14.71□□□□□ -0.05
TRAF4-210ENST00000475329 IRX2Q9BZI1 471 aaPredicted RBP14.71□□□□□ -0.05
TRAF4-210ENST00000475329 HTTP42858 3142 aa14.71□□□□□ -0.05
TRAF4-210ENST00000475329 BTNL10A8MVZ5 291 aa14.7□□□□□ -0.06
TRAF4-210ENST00000475329 TLR3O15455 904 aaKnown RBP14.7□□□□□ -0.06
TRAF4-210ENST00000475329 CD4P01730 458 aa14.7□□□□□ -0.06
TRAF4-210ENST00000475329 ITGA4P13612 1032 aa14.7□□□□□ -0.06
TRAF4-210ENST00000475329 CHRNB2P17787 502 aa14.7□□□□□ -0.06
TRAF4-210ENST00000475329 CDK7P50613 346 aa14.7□□□□□ -0.06
TRAF4-210ENST00000475329 ZNF132P52740 706 aa14.7□□□□□ -0.06
TRAF4-210ENST00000475329 MYO1EQ12965 1108 aa14.7□□□□□ -0.06
TRAF4-210ENST00000475329 DSC3Q14574 896 aa14.7□□□□□ -0.06
TRAF4-210ENST00000475329 GLRA4Q5JXX5 417 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms