RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 GOLGA2P5Q9HBQ8 144 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 ASAH2Q9NR71 780 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 SEMA4GQ9NTN9 838 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 TPCN1Q9ULQ1 816 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 TNFSF13BQ9Y275 285 aa13.82□□□□□ -0.2
SKA3-206ENST00000475251 BTBD18B2RXH4 712 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 MED24O75448 989 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 ORC2Q13416 577 aaPredicted RBP13.81□□□□□ -0.2
SKA3-206ENST00000475251 LPAL2Q16609 132 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 CTXN3Q4LDR2 81 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 PRR23CQ6ZRP0 262 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 MFSD6LQ8IWD5 586 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 YAF2Q8IY57 180 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 APPL2Q8NEU8 664 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 TCEAL4Q96EI5 215 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 TRPV4Q9HBA0 871 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 AFF4Q9UHB7 1163 aaKnown RBP13.81□□□□□ -0.2
SKA3-206ENST00000475251 FBXL5Q9UKA1 691 aa13.81□□□□□ -0.2
SKA3-206ENST00000475251 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.81□□□□□ -0.2
SKA3-206ENST00000475251 PAPSS2O95340 614 aaPredicted RBP13.8□□□□□ -0.2
SKA3-206ENST00000475251 CTDNEP1O95476 244 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 EDN1P05305 212 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 CHRNB1P11230 501 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 CCNE1P24864 410 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 MCM7P33993 719 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 PLD1Q13393 1074 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 MRPL58Q14197 206 aaKnown RBP13.8□□□□□ -0.2
SKA3-206ENST00000475251 ZNF568Q3ZCX4 644 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 XKR4Q5GH76 650 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 NT5DC1Q5TFE4 455 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 LONP2Q86WA8 852 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 ZSCAN18Q8TBC5 510 aaPredicted RBP13.8□□□□□ -0.2
SKA3-206ENST00000475251 FAM200AQ8TCP9 573 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 ACAP3Q96P50 834 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 KIFC3Q9BVG8 833 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 OXCT2Q9BYC2 517 aaPredicted RBP13.8□□□□□ -0.2
SKA3-206ENST00000475251 MRPL4Q9BYD3 311 aaKnown RBP13.8□□□□□ -0.2
SKA3-206ENST00000475251 SLITRK6Q9H5Y7 841 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 C8orf33Q9H7E9 229 aaPredicted RBP13.8□□□□□ -0.2
SKA3-206ENST00000475251 USP20Q9Y2K6 914 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 COL4A2P08572 1712 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 TICRRQ7Z2Z1 1910 aa13.8□□□□□ -0.2
SKA3-206ENST00000475251 CHADO15335 359 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 SEC24AO95486 1093 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 OR52Z1P0C646 297 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 MYL4P12829 197 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 FDPSP14324 419 aaKnown RBP13.79□□□□□ -0.2
SKA3-206ENST00000475251 CPB1P15086 417 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 KCNE1P15382 129 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 IGFBP6P24592 240 aaPredicted RBP13.79□□□□□ -0.2
SKA3-206ENST00000475251 MCM4P33991 863 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 CCR2P41597 374 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 EPHA5P54756 1037 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 SATB1Q01826 763 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 SOX4Q06945 474 aaPredicted RBP13.79□□□□□ -0.2
SKA3-206ENST00000475251 TWF1Q12792 350 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 PTGDRQ13258 359 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 SAFBQ15424 915 aaKnown RBP eCLIP13.79□□□□□ -0.2
SKA3-206ENST00000475251 DGKKQ5KSL6 1271 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 IL31Q6EBC2 164 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 ALKAL1Q6UXT8 129 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 SUSD3Q96L08 255 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 TMEM60Q9H2L4 133 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.79□□□□□ -0.2
SKA3-206ENST00000475251 STK24Q9Y6E0 443 aa13.79□□□□□ -0.2
SKA3-206ENST00000475251 KMT2BQ9UMN6 2715 aaPredicted RBP13.79□□□□□ -0.2
SKA3-206ENST00000475251 CCDC169A6NNP5 214 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 HEPACAM2A8MVW5 462 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 MCF2P10911 925 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 MARCKSP29966 332 aaPredicted RBP13.78□□□□□ -0.2
SKA3-206ENST00000475251 VIPR2P41587 438 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 KPNA1P52294 538 aaPredicted RBP13.78□□□□□ -0.2
SKA3-206ENST00000475251 OSTNP61366 133 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 DMP1Q13316 513 aaPredicted RBP13.78□□□□□ -0.2
SKA3-206ENST00000475251 HAUS6Q7Z4H7 955 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 SYNPOQ8N3V7 929 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 CEP120Q8N960 986 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 DDX12PQ92771 950 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 GTF3C6Q969F1 213 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 ZSWIM3Q96MP5 696 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 PHF12Q96QT6 1004 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 ACO2Q99798 780 aaKnown RBP13.78□□□□□ -0.2
SKA3-206ENST00000475251 TCHPQ9BT92 498 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 CDT1Q9H211 546 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 BHMT2Q9H2M3 363 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 TMEM134Q9H6X4 195 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 CNTN3Q9P232 1028 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 EPG5Q9HCE0 2579 aa13.78□□□□□ -0.2
SKA3-206ENST00000475251 TPRP12270 2363 aaKnown RBP13.78□□□□□ -0.2
SKA3-206ENST00000475251 CHURC1-FNTBB4DL54 471 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 ARNTLO00327 626 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 WNT7AO00755 349 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 ACACBO00763 2458 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 HRO43593 1189 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 HOXA6P31267 233 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 CCT6AP40227 531 aaKnown RBP13.77□□□□□ -0.21
SKA3-206ENST00000475251 FNTBP49356 437 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 ANAPC15P60006 121 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 DMWDQ09019 674 aa13.77□□□□□ -0.21
SKA3-206ENST00000475251 FCHO2Q0JRZ9 810 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms