RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 NELL2Q99435 816 aa27.22■■□□□ 1.95
TMEM54-205ENST00000475208 TIPINQ9BVW5 301 aa27.22■■□□□ 1.95
TMEM54-205ENST00000475208 ZNF197O14709 1029 aa27.21■■□□□ 1.95
TMEM54-205ENST00000475208 SPTLC1O15269 473 aa27.21■■□□□ 1.95
TMEM54-205ENST00000475208 NCAM2O15394 837 aa27.21■■□□□ 1.95
TMEM54-205ENST00000475208 GUCY2CP25092 1073 aa27.21■■□□□ 1.95
TMEM54-205ENST00000475208 STRN3Q13033 797 aa27.21■■□□□ 1.95
TMEM54-205ENST00000475208 GRM2Q14416 872 aa27.21■■□□□ 1.95
TMEM54-205ENST00000475208 ZRSR1Q15695 479 aaKnown RBP27.21■■□□□ 1.95
TMEM54-205ENST00000475208 SEZ6Q53EL9 994 aa27.21■■□□□ 1.95
TMEM54-205ENST00000475208 FAM78AQ5JUQ0 283 aa27.21■■□□□ 1.95
TMEM54-205ENST00000475208 DNASE1L2Q92874 299 aa27.21■■□□□ 1.95
TMEM54-205ENST00000475208 TBC1D32Q96NH3 1257 aa27.21■■□□□ 1.95
TMEM54-205ENST00000475208 MRPS17Q9Y2R5 130 aaKnown RBP27.21■■□□□ 1.95
TMEM54-205ENST00000475208 GPR179Q6PRD1 2367 aa27.2■■□□□ 1.95
TMEM54-205ENST00000475208 TOM1L1O75674 476 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 CCR2P41597 374 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 RAD51AP2Q09MP3 1159 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 SLC10A6Q3KNW5 377 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 ELMOD1Q8N336 334 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 APPL2Q8NEU8 664 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 SPIRE2Q8WWL2 714 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 DDX12PQ92771 950 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 NTPCRQ9BSD7 190 aaKnown RBP27.2■■□□□ 1.94
TMEM54-205ENST00000475208 ZFP14Q9HCL3 533 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.2■■□□□ 1.94
TMEM54-205ENST00000475208 TUBGCP4Q9UGJ1 667 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 PCDHGA2Q9Y5H1 932 aa27.2■■□□□ 1.94
TMEM54-205ENST00000475208 PDCD11Q14690 1871 aaKnown RBP27.19■■□□□ 1.94
TMEM54-205ENST00000475208 NRG2O14511 850 aaPredicted RBP27.19■■□□□ 1.94
TMEM54-205ENST00000475208 MICAL2O94851 1124 aa27.19■■□□□ 1.94
TMEM54-205ENST00000475208 RPS9P46781 194 aaKnown RBP27.19■■□□□ 1.94
TMEM54-205ENST00000475208 ADCY1Q08828 1119 aa27.19■■□□□ 1.94
TMEM54-205ENST00000475208 CYP4A22Q5TCH4 519 aa27.19■■□□□ 1.94
TMEM54-205ENST00000475208 TMEM161BQ8NDZ6 487 aa27.19■■□□□ 1.94
TMEM54-205ENST00000475208 ATRIPQ8WXE1 791 aa27.19■■□□□ 1.94
TMEM54-205ENST00000475208 BORCS6Q96GS4 357 aa27.19■■□□□ 1.94
TMEM54-205ENST00000475208 ASB16Q96NS5 453 aa27.19■■□□□ 1.94
TMEM54-205ENST00000475208 BRD9Q9H8M2 597 aa27.19■■□□□ 1.94
TMEM54-205ENST00000475208 AFF4Q9UHB7 1163 aaKnown RBP27.19■■□□□ 1.94
TMEM54-205ENST00000475208 PCDHB8Q9UN66 801 aa27.19■■□□□ 1.94
TMEM54-205ENST00000475208 SHISA7A6NL88 538 aa27.18■■□□□ 1.94
TMEM54-205ENST00000475208 PLS3P13797 630 aa27.18■■□□□ 1.94
TMEM54-205ENST00000475208 TWF1Q12792 350 aa27.18■■□□□ 1.94
TMEM54-205ENST00000475208 IQCEQ6IPM2 695 aa27.18■■□□□ 1.94
TMEM54-205ENST00000475208 DGLUCYQ7Z3D6 616 aa27.18■■□□□ 1.94
TMEM54-205ENST00000475208 HS6ST3Q8IZP7 471 aa27.18■■□□□ 1.94
TMEM54-205ENST00000475208 CXCL8P10145 99 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 MAPTP10636 758 aaKnown RBP27.17■■□□□ 1.94
TMEM54-205ENST00000475208 CPB1P15086 417 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 SMTNP53814 917 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 TSSK4Q6SA08 328 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 ZPBP2Q6X784 338 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 TMEM130Q8N3G9 435 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 ZBTB44Q8NCP5 570 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 ZNF512Q96ME7 567 aaPredicted RBP27.17■■□□□ 1.94
TMEM54-205ENST00000475208 PNMA5Q96PV4 448 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 TRMT61BQ9BVS5 477 aaKnown RBP27.17■■□□□ 1.94
TMEM54-205ENST00000475208 ZSCAN32Q9NX65 697 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 CEP72Q9P209 647 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 NCDNQ9UBB6 729 aa27.17■■□□□ 1.94
TMEM54-205ENST00000475208 CLDN3O15551 220 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 MARCKSP29966 332 aaPredicted RBP27.16■■□□□ 1.94
TMEM54-205ENST00000475208 MCL1Q07820 350 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 FZD5Q13467 585 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 PUM1Q14671 1186 aaKnown RBP eCLIP27.16■■□□□ 1.94
TMEM54-205ENST00000475208 HYIQ5T013 277 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 RNF19BQ6ZMZ0 732 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 SMARCD2Q92925 531 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 ZSWIM3Q96MP5 696 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 PLIN2Q99541 437 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 KIF2CQ99661 725 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 PRMT8Q9NR22 394 aaPredicted RBP27.16■■□□□ 1.94
TMEM54-205ENST00000475208 KCNG1Q9UIX4 513 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 MAFFQ9ULX9 164 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 NDRG2Q9UN36 371 aaKnown RBP27.16■■□□□ 1.94
TMEM54-205ENST00000475208 DNAH14Q0VDD8 3507 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 CEP250Q9BV73 2442 aa27.16■■□□□ 1.94
TMEM54-205ENST00000475208 MOSPD3O75425 235 aa27.15■■□□□ 1.94
TMEM54-205ENST00000475208 MYL4P12829 197 aa27.15■■□□□ 1.94
TMEM54-205ENST00000475208 GJA1P17302 382 aa27.15■■□□□ 1.94
TMEM54-205ENST00000475208 MATR3P43243 847 aaKnown RBP eCLIP27.15■■□□□ 1.94
TMEM54-205ENST00000475208 ATP2C1P98194 919 aaPredicted RBP27.15■■□□□ 1.94
TMEM54-205ENST00000475208 SPAG1Q07617 926 aa27.15■■□□□ 1.94
TMEM54-205ENST00000475208 VITQ6UXI7 678 aa27.15■■□□□ 1.94
TMEM54-205ENST00000475208 SYT2Q8N9I0 419 aaPredicted RBP27.15■■□□□ 1.94
TMEM54-205ENST00000475208 LEMD2Q8NC56 503 aa27.15■■□□□ 1.94
TMEM54-205ENST00000475208 NELL1Q92832 810 aa27.15■■□□□ 1.94
TMEM54-205ENST00000475208 IRF7Q92985 503 aa27.15■■□□□ 1.94
TMEM54-205ENST00000475208 ASAH2Q9NR71 780 aa27.15■■□□□ 1.94
TMEM54-205ENST00000475208 COL4A2P08572 1712 aa27.14■■□□□ 1.94
TMEM54-205ENST00000475208 MED19A0JLT2 244 aaPredicted RBP27.14■■□□□ 1.94
TMEM54-205ENST00000475208 MAN2B1O00754 1011 aa27.14■■□□□ 1.94
TMEM54-205ENST00000475208 GDI1P31150 447 aa27.14■■□□□ 1.94
TMEM54-205ENST00000475208 YWHAHQ04917 246 aaPredicted RBP27.14■■□□□ 1.94
TMEM54-205ENST00000475208 MTAPQ13126 283 aa27.14■■□□□ 1.94
TMEM54-205ENST00000475208 ERICH6BQ5W0A0 696 aa27.14■■□□□ 1.94
TMEM54-205ENST00000475208 MCTP1Q6DN14 999 aa27.14■■□□□ 1.94
TMEM54-205ENST00000475208 KIF12Q96FN5 646 aa27.14■■□□□ 1.94
TMEM54-205ENST00000475208 HAPLN2Q9GZV7 340 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms