RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 STRN3Q13033 797 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 SNW1Q13573 536 aaKnown RBP12.91□□□□□ -0.34
CLIP2-204ENST00000474962 STXBP4Q6ZWJ1 553 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 APBB1IPQ7Z5R6 666 aaPredicted RBP12.91□□□□□ -0.34
CLIP2-204ENST00000474962 GRASPQ7Z6J2 395 aaPredicted RBP12.91□□□□□ -0.34
CLIP2-204ENST00000474962 TMEM130Q8N3G9 435 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 SLC44A3Q8N4M1 653 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 TMEM105Q8N8V8 129 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 ENGASEQ8NFI3 743 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 SPIRE2Q8WWL2 714 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 C18orf25Q96B23 403 aaPredicted RBP12.91□□□□□ -0.34
CLIP2-204ENST00000474962 ACAP3Q96P50 834 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 CCDC94Q9BW85 323 aaPredicted RBP12.91□□□□□ -0.34
CLIP2-204ENST00000474962 MRPL44Q9H9J2 332 aaKnown RBP12.91□□□□□ -0.34
CLIP2-204ENST00000474962 LMBRD1Q9NUN5 540 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 EPS15L1Q9UBC2 864 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 SEL1LQ9UBV2 794 aa12.91□□□□□ -0.34
CLIP2-204ENST00000474962 TRIP11Q15643 1979 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 CLUHO75153 1309 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 PVALEFA0A1B0GWK0 134 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 H0Y858 1186 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 K7ENM7 598 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 CCL16O15467 120 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 PI15O43692 258 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 SMC2O95347 1197 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 MAPTP10636 758 aaKnown RBP12.9□□□□□ -0.34
CLIP2-204ENST00000474962 MCF2P10911 925 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 LAMP2P13473 410 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 KCNE1P15382 129 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 NPR3P17342 541 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 PTMSP20962 102 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 SCP2P22307 547 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 PTPN5P54829 565 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 CUL4BQ13620 913 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 RAB33AQ14088 237 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 POSTNQ15063 836 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 SLC10A6Q3KNW5 377 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 ASTLQ6HA08 431 aaPredicted RBP12.9□□□□□ -0.34
CLIP2-204ENST00000474962 MPZL3Q6UWV2 235 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.9□□□□□ -0.34
CLIP2-204ENST00000474962 UNC13DQ70J99 1090 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 SFR1Q86XK3 245 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 GRAMD1CQ8IYS0 662 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 DNAJC19Q96DA6 116 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 PRRX2Q99811 253 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 HAPLN2Q9GZV7 340 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 MFSD1Q9H3U5 465 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 TOPORSQ9NS56 1045 aaPredicted RBP12.9□□□□□ -0.34
CLIP2-204ENST00000474962 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 FAM86C1Q9NVL1 165 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.9□□□□□ -0.34
CLIP2-204ENST00000474962 IGSF9Q9P2J2 1179 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 FBXW11Q9UKB1 542 aa12.9□□□□□ -0.34
CLIP2-204ENST00000474962 MTCL1Q9Y4B5 1905 aaKnown RBP12.9□□□□□ -0.35
CLIP2-204ENST00000474962 TMEM189-UBE2V1I3L0A0 370 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 TOM1L1O75674 476 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 C8AP07357 584 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 ZNF131P52739 623 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 PPM1LQ5SGD2 360 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 CNNM4Q6P4Q7 775 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 GET4Q7L5D6 327 aaPredicted RBP12.89□□□□□ -0.35
CLIP2-204ENST00000474962 HAUS6Q7Z4H7 955 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 FLCNQ8NFG4 579 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 DDX27Q96GQ7 796 aaKnown RBP12.89□□□□□ -0.35
CLIP2-204ENST00000474962 SNX27Q96L92 541 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 UROC1Q96N76 676 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 RPP25Q9BUL9 199 aaKnown RBP12.89□□□□□ -0.35
CLIP2-204ENST00000474962 TBC1D7Q9P0N9 293 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 ANKFY1Q9P2R3 1169 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 MTRRQ9UBK8 725 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 POLIQ9UNA4 740 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 DUSP12Q9UNI6 340 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 PCDHB13Q9Y5F0 798 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 CDY1Q9Y6F8 540 aa12.89□□□□□ -0.35
CLIP2-204ENST00000474962 PODXLO00592 558 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 CLDN3O15551 220 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 TRAPPC3O43617 180 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 GCNT3O95395 438 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 MBD3O95983 291 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 RPN1P04843 607 aaKnown RBP12.88□□□□□ -0.35
CLIP2-204ENST00000474962 CFHP08603 1231 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 FSHRP23945 695 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 CASP1P29466 404 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 NMT1P30419 496 aaKnown RBP12.88□□□□□ -0.35
CLIP2-204ENST00000474962 MCM4P33991 863 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 CLCN5P51795 746 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 NCKAP1LP55160 1127 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 SPAG1Q07617 926 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 ALCAMQ13740 583 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 LIN9Q5TKA1 542 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 PDXDC1Q6P996 788 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 SIX5Q8N196 739 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 SLC7A14Q8TBB6 771 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 ATOH1Q92858 354 aaPredicted RBP12.88□□□□□ -0.35
CLIP2-204ENST00000474962 SMARCE1Q969G3 411 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 BICD1Q96G01 975 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 SLC38A7Q9NVC3 462 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 HCFC1R1Q9NWW0 138 aa12.88□□□□□ -0.35
CLIP2-204ENST00000474962 CNTN3Q9P232 1028 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms