RNA–Protein interactions for RNA: ENST00000474273.5

SSB-210, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 2

Gene SSB, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-210ENST00000474273 C1orf162Q8NEQ5 155 aaPredicted RBP5.62□□□□□ -1.51
SSB-210ENST00000474273 ZNF778Q96MU6 729 aa5.62□□□□□ -1.51
SSB-210ENST00000474273 KRTAP1-5Q9BYS1 174 aa5.62□□□□□ -1.51
SSB-210ENST00000474273 REXO4Q9GZR2 422 aaKnown RBP5.62□□□□□ -1.51
SSB-210ENST00000474273 TMEM74BQ9NUR3 256 aa5.62□□□□□ -1.51
SSB-210ENST00000474273 FAM30AQ9NZY2 134 aa5.62□□□□□ -1.51
SSB-210ENST00000474273 SAP30BPQ9UHR5 308 aaKnown RBP5.62□□□□□ -1.51
SSB-210ENST00000474273 INTUQ9ULD6 942 aa5.62□□□□□ -1.51
SSB-210ENST00000474273 ACTL7AQ9Y615 435 aa5.62□□□□□ -1.51
SSB-210ENST00000474273 KLHL33A6NCF5 533 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 GPR32O75388 356 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 FPR1P21462 350 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 WASP42768 502 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 ALDH1A3P47895 512 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 SRSF4Q08170 494 aaKnown RBP5.61□□□□□ -1.51
SSB-210ENST00000474273 ZNF529Q6P280 563 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 ACTRT2Q8TDY3 377 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 JADE3Q92613 823 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 CCDC8Q9H0W5 538 aaPredicted RBP5.61□□□□□ -1.51
SSB-210ENST00000474273 TBCCD1Q9NVR7 557 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 TRHDEQ9UKU6 1024 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 MRFAP1Q9Y605 127 aa5.61□□□□□ -1.51
SSB-210ENST00000474273 MYBBP1AQ9BQG0 1328 aaKnown RBP5.6□□□□□ -1.51
SSB-210ENST00000474273 ALG1L2C9J202 215 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 IKBKBO14920 756 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 NDUFS2O75306 463 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 MT-CO1P00395 513 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 AMY1AP04745 511 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 MYBL2P10244 700 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 PCSK1P29120 753 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 CDKN1CP49918 316 aaPredicted RBP5.6□□□□□ -1.51
SSB-210ENST00000474273 MTMR1Q13613 665 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 SEM1Q6ZVN7 128 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 RHOT1Q8IXI2 618 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 PRPF38AQ8NAV1 312 aaKnown RBP5.6□□□□□ -1.51
SSB-210ENST00000474273 FUBP3Q96I24 572 aaKnown RBP eCLIP5.6□□□□□ -1.51
SSB-210ENST00000474273 BOD1Q96IK1 185 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 MYOCQ99972 504 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 CASS4Q9NQ75 786 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 SLC23A1Q9UHI7 598 aa5.6□□□□□ -1.51
SSB-210ENST00000474273 KATNA1O75449 491 aa5.59□□□□□ -1.51
SSB-210ENST00000474273 ZFPL1O95159 310 aa5.59□□□□□ -1.51
SSB-210ENST00000474273 DDCP20711 480 aa5.59□□□□□ -1.51
SSB-210ENST00000474273 SLC16A1P53985 500 aa5.59□□□□□ -1.51
SSB-210ENST00000474273 PROK1P58294 105 aa5.59□□□□□ -1.51
SSB-210ENST00000474273 OCA2Q04671 838 aa5.59□□□□□ -1.51
SSB-210ENST00000474273 MTM1Q13496 603 aa5.59□□□□□ -1.51
SSB-210ENST00000474273 FAM50AQ14320 339 aaKnown RBP5.59□□□□□ -1.51
SSB-210ENST00000474273 ZNF788Q6ZQV5 615 aa5.59□□□□□ -1.51
SSB-210ENST00000474273 FAM43AQ8N2R8 423 aa5.59□□□□□ -1.51
SSB-210ENST00000474273 GALNT9Q9HCQ5 603 aa5.59□□□□□ -1.51
SSB-210ENST00000474273 ARPP21Q9UBL0 812 aaPredicted RBP5.59□□□□□ -1.51
SSB-210ENST00000474273 ZNF70Q9UC06 446 aaPredicted RBP5.59□□□□□ -1.51
SSB-210ENST00000474273 RUVBL1Q9Y265 456 aaKnown RBP5.59□□□□□ -1.51
SSB-210ENST00000474273 A0A1B0GTW7 788 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 SHTN1A0MZ66 631 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 XPOTO43592 962 aaKnown RBP5.58□□□□□ -1.52
SSB-210ENST00000474273 PCDHGA12O60330 932 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 ALAS1P13196 640 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 C5AR1P21730 350 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 EVA1CP58658 441 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 CXADRP78310 365 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 ATP8B2P98198 1209 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 CREMQ03060 361 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 PCBP2Q15366 365 aaKnown RBP eCLIP5.58□□□□□ -1.52
SSB-210ENST00000474273 ATP2B3Q16720 1220 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 ABCB5Q2M3G0 1257 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.58□□□□□ -1.52
SSB-210ENST00000474273 UBE3BQ7Z3V4 1068 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 ZGPATQ8N5A5 531 aaKnown RBP5.58□□□□□ -1.52
SSB-210ENST00000474273 MTMR8Q96EF0 704 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 RNF31Q96EP0 1072 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 HEPHQ9BQS7 1158 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 ZSWIM1Q9BR11 485 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 AIFM2Q9BRQ8 373 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 GSTO2Q9H4Y5 243 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 FBXO34Q9NWN3 711 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 TUBD1Q9UJT1 453 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 PCDHGA9Q9Y5G4 932 aaKnown RBP5.58□□□□□ -1.52
SSB-210ENST00000474273 PCDHGA8Q9Y5G5 932 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 PCDHGA7Q9Y5G6 932 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 PCDHGA6Q9Y5G7 932 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 PCDHGA3Q9Y5H0 932 aa5.58□□□□□ -1.52
SSB-210ENST00000474273 TCRBV7S2A1N4TA0A589 114 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 GABRDO14764 452 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 CKBP12277 381 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 GCSHP23434 173 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 SLC6A2P23975 617 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 MIGA2Q7L4E1 593 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 RSPH3Q86UC2 560 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 FITM2Q8N6M3 262 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 HDAC10Q969S8 669 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 RNPEPQ9H4A4 650 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 TDP1Q9NUW8 608 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 ASB6Q9NWX5 421 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 PCDHA13Q9Y5I0 950 aa5.57□□□□□ -1.52
SSB-210ENST00000474273 WASHC2CQ9Y4E1 1318 aa5.56□□□□□ -1.52
SSB-210ENST00000474273 WIPF3A6NGB9 483 aa5.56□□□□□ -1.52
SSB-210ENST00000474273 PRSS23O95084 383 aa5.56□□□□□ -1.52
SSB-210ENST00000474273 KRTAP10-7P60409 375 aaPredicted RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms