RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 SLC8B1Q6J4K2 584 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 RTL10Q7L3V2 364 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 SYCP3Q8IZU3 236 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 APPL2Q8NEU8 664 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 ZNF461Q8TAF7 563 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 POMGNT1Q8WZA1 660 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 TRIM9Q9C026 710 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 FAM13BQ9NYF5 915 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 RAPGEFL1Q9UHV5 662 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 PCDHB8Q9UN66 801 aa12.15□□□□□ -0.46
CKS1B-206ENST00000474215 CLUHO75153 1309 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 TMEM221A6NGB7 291 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 M0QZQ0 153 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 M0R296 226 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 POLR2DO15514 142 aaKnown RBP12.14□□□□□ -0.47
CKS1B-206ENST00000474215 C8AP07357 584 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 PAX3P23760 479 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 HOXA9P31269 272 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 GUCY2FP51841 1108 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 TMEM132DQ14C87 1099 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 RESP18Q5W5W9 173 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 CNNM4Q6P4Q7 775 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 CRELD2Q6UXH1 353 aaPredicted RBP12.14□□□□□ -0.47
CKS1B-206ENST00000474215 HFE2Q6ZVN8 426 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 STXBP4Q6ZWJ1 553 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 BMP8AQ7Z5Y6 402 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 UBALD2Q8IYN6 164 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 TMEM130Q8N3G9 435 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 BEST2Q8NFU1 509 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 SLC7A14Q8TBB6 771 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 C7orf25Q9BPX7 421 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 FGFBP2Q9BYJ0 223 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 TMEM206Q9H813 350 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 MAGEF1Q9HAY2 307 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.14□□□□□ -0.47
CKS1B-206ENST00000474215 FBXL5Q9UKA1 691 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 SORCS3Q9UPU3 1222 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 ZDHHC9Q9Y397 364 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 PLXNA3P51805 1871 aa12.14□□□□□ -0.47
CKS1B-206ENST00000474215 TRIP11Q15643 1979 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
CKS1B-206ENST00000474215 XYLBO75191 536 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 PRPF6O94906 941 aaKnown RBP12.13□□□□□ -0.47
CKS1B-206ENST00000474215 ABLIM3O94929 683 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 OAZ2O95190 189 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 IL18RAPO95256 599 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 LDHAP00338 332 aaKnown RBP12.13□□□□□ -0.47
CKS1B-206ENST00000474215 ASGR2P07307 311 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 NFICP08651 508 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 GARTP22102 1010 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 GBP2P32456 591 aaPredicted RBP12.13□□□□□ -0.47
CKS1B-206ENST00000474215 AARSP49588 968 aaKnown RBP eCLIP12.13□□□□□ -0.47
CKS1B-206ENST00000474215 ARPP19P56211 112 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 LILRA4P59901 499 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 ASIC1P78348 528 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 ROR1Q01973 937 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 SIGLEC14Q08ET2 396 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 MTMR3Q13615 1198 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 CTXN3Q4LDR2 81 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 DSTYKQ6XUX3 929 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 GRASPQ7Z6J2 395 aaPredicted RBP12.13□□□□□ -0.47
CKS1B-206ENST00000474215 HPS3Q969F9 1004 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 PBXIP1Q96AQ6 731 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 MFSD14AQ96MC6 490 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 PYM1Q9BRP8 204 aaKnown RBP12.13□□□□□ -0.47
CKS1B-206ENST00000474215 FAM213AQ9BRX8 229 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 KCNH3Q9ULD8 1083 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 C2CD2Q9Y426 696 aa12.13□□□□□ -0.47
CKS1B-206ENST00000474215 CITO14578 2027 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 ANO9A1A5B4 782 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 PIRO00625 290 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 CCL16O15467 120 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 POU2F2P09086 479 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 ATF2P15336 505 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 FSHRP23945 695 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 ELF1P32519 619 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 C9orf57Q5W0N0 161 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 TPGS2Q68CL5 300 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 ZNF280DQ6N043 979 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 GLIS3Q8NEA6 775 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 LEO1Q8WVC0 666 aaPredicted RBP12.12□□□□□ -0.47
CKS1B-206ENST00000474215 SAAL1Q96ER3 474 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 ASIC4Q96FT7 647 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 SPATA32Q96LK8 384 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 MYADMQ96S97 322 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 OXCT2Q9BYC2 517 aaPredicted RBP12.12□□□□□ -0.47
CKS1B-206ENST00000474215 KCNK12Q9HB15 430 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 DPP3Q9NY33 737 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 IGSF9Q9P2J2 1179 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 EPS15L1Q9UBC2 864 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 POLIQ9UNA4 740 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 HCN4Q9Y3Q4 1203 aa12.12□□□□□ -0.47
CKS1B-206ENST00000474215 ARIH1Q9Y4X5 557 aaPredicted RBP12.12□□□□□ -0.47
CKS1B-206ENST00000474215 TIMM13Q9Y5L4 95 aaPredicted RBP12.12□□□□□ -0.47
CKS1B-206ENST00000474215 MYH15Q9Y2K3 1946 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 PVALEFA0A1B0GWK0 134 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 ARHGEF37A1IGU5 675 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 WDR27A2RRH5 827 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 PRRG1O14668 218 aa12.11□□□□□ -0.47
CKS1B-206ENST00000474215 PPEF2O14830 753 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms