RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 REV3LO60673 3130 aa11.2□□□□□ -0.62
CASC3-204ENST00000474190 FNDC1Q4ZHG4 1894 aaPredicted RBP11.19□□□□□ -0.62
CASC3-204ENST00000474190 LILRB3O75022 631 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 ZC3H11AO75152 810 aaKnown RBP eCLIP11.19□□□□□ -0.62
CASC3-204ENST00000474190 GNA14O95837 355 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 ITGB3P05106 788 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 EEF1GP26641 437 aaKnown RBP11.19□□□□□ -0.62
CASC3-204ENST00000474190 POLR2BP30876 1174 aaKnown RBP11.19□□□□□ -0.62
CASC3-204ENST00000474190 FMO5P49326 533 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 LILRA4P59901 499 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 MYL6P60660 151 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 APBA1Q02410 837 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 KCNMA1Q12791 1236 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 KCNH2Q12809 1159 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 SURF1Q15526 300 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 TIGD5Q53EQ6 642 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 ABI1Q8IZP0 508 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 KLHL23Q8NBE8 558 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 RPS6KC1Q96S38 1066 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 TUBGCP2Q9BSJ2 902 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 ZBED2Q9BTP6 218 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 VRTNQ9H8Y1 702 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 TMEM8AQ9HCN3 771 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 SLC38A7Q9NVC3 462 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 RNF216Q9NWF9 866 aaPredicted RBP11.19□□□□□ -0.62
CASC3-204ENST00000474190 ITGA11Q9UKX5 1188 aa11.19□□□□□ -0.62
CASC3-204ENST00000474190 PRG3Q9Y2Y8 225 aaPredicted RBP11.19□□□□□ -0.62
CASC3-204ENST00000474190 I3L4J1 428 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 M0QZQ0 153 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 STAU1O95793 577 aaKnown RBP11.18□□□□□ -0.62
CASC3-204ENST00000474190 CAVIN2O95810 425 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 ASS1P00966 412 aaKnown RBP11.18□□□□□ -0.62
CASC3-204ENST00000474190 HLA-DRAP01903 254 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 LAG3P18627 525 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 TNNI1P19237 187 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 RPL9P32969 192 aaKnown RBP11.18□□□□□ -0.62
CASC3-204ENST00000474190 BRCC3P46736 316 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 PLCB3Q01970 1234 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 HSP90AA2PQ14568 343 aaPredicted RBP11.18□□□□□ -0.62
CASC3-204ENST00000474190 RAB30Q15771 203 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 CCDC40Q4G0X9 1142 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 SPOPLQ6IQ16 392 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 DCLRE1AQ6PJP8 1040 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 RNF214Q8ND24 703 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 BEST2Q8NFU1 509 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 SPPL3Q8TCT6 385 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 HASPINQ8TF76 798 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 TIFAQ96CG3 184 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 UROC1Q96N76 676 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 TGS1Q96RS0 853 aaKnown RBP11.18□□□□□ -0.62
CASC3-204ENST00000474190 FNBP1Q96RU3 617 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 RTP3Q9BQQ7 232 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 PI4K2AQ9BTU6 479 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 SDCBP2Q9H190 292 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 SIX2Q9NPC8 291 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 CHST7Q9NS84 486 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 TAB2Q9NYJ8 693 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 AGAP1Q9UPQ3 857 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 ANK1P16157 1881 aa11.18□□□□□ -0.62
CASC3-204ENST00000474190 RALGAPA2Q2PPJ7 1873 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 A0A1B0GTH6 734 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 RFXAPO00287 272 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 FSCN2O14926 492 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 GRM6O15303 877 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 TEX33O43247 280 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 TBC1D4O60343 1298 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 FGF18O76093 207 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 B3GAT3O94766 335 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 ALDH2P05091 517 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 KRT13P13646 458 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 PBX1P40424 430 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 OR1G1P47890 313 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 MXI1P50539 228 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 COPB1P53618 953 aaKnown RBP11.17□□□□□ -0.62
CASC3-204ENST00000474190 AP3M2P53677 418 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 RNASELQ05823 741 aaKnown RBP11.17□□□□□ -0.62
CASC3-204ENST00000474190 NCOA4Q13772 614 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 MRPL58Q14197 206 aaKnown RBP11.17□□□□□ -0.62
CASC3-204ENST00000474190 MAN2A1Q16706 1144 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 PTPN21Q16825 1174 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 VWA3BQ502W6 1294 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 DCAF17Q5H9S7 520 aaPredicted RBP11.17□□□□□ -0.62
CASC3-204ENST00000474190 KRT39Q6A163 491 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 RSPO2Q6UXX9 243 aaPredicted RBP11.17□□□□□ -0.62
CASC3-204ENST00000474190 LRRC52Q8N7C0 313 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 UBR7Q8N806 425 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 MAFAQ8NHW3 353 aaPredicted RBP11.17□□□□□ -0.62
CASC3-204ENST00000474190 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
CASC3-204ENST00000474190 SUSD3Q96L08 255 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 B3GALT6Q96L58 329 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 ZNF558Q96NG5 402 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 NAT10Q9H0A0 1025 aaKnown RBP11.17□□□□□ -0.62
CASC3-204ENST00000474190 NDST4Q9H3R1 872 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 CERS4Q9HA82 394 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 RTN4Q9NQC3 1192 aaKnown RBP11.17□□□□□ -0.62
CASC3-204ENST00000474190 GDAP2Q9NXN4 497 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 AJAP1Q9UKB5 411 aaPredicted RBP11.17□□□□□ -0.62
CASC3-204ENST00000474190 ADAM28Q9UKQ2 775 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 SIK3Q9Y2K2 1263 aa11.17□□□□□ -0.62
CASC3-204ENST00000474190 FAN1Q9Y2M0 1017 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms