RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TMC5Q6UXY8 1006 aa15.41■□□□□ 0.06
VAMP4-203ENST00000474047 DSTYKQ6XUX3 929 aa15.41■□□□□ 0.06
VAMP4-203ENST00000474047 EPM2AIP1Q7L775 607 aaPredicted RBP15.41■□□□□ 0.06
VAMP4-203ENST00000474047 APPL2Q8NEU8 664 aa15.41■□□□□ 0.06
VAMP4-203ENST00000474047 CACTINQ8WUQ7 758 aaKnown RBP15.41■□□□□ 0.06
VAMP4-203ENST00000474047 PDCD11Q14690 1871 aaKnown RBP15.41■□□□□ 0.06
VAMP4-203ENST00000474047 SYN3O14994 580 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 TGM5O43548 720 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 RPN1P04843 607 aaKnown RBP15.4■□□□□ 0.06
VAMP4-203ENST00000474047 OR1D2P34982 312 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 TFAMQ00059 246 aaKnown RBP15.4■□□□□ 0.06
VAMP4-203ENST00000474047 SCFD1Q8WVM8 642 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 RPGRIP1Q96KN7 1286 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 SUSD3Q96L08 255 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 NECTIN4Q96NY8 510 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 CLSTN3Q9BQT9 956 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 PHF7Q9BWX1 381 aaPredicted RBP15.4■□□□□ 0.06
VAMP4-203ENST00000474047 PLEKHA4Q9H4M7 779 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 KIAA1586Q9HCI6 787 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 DPP3Q9NY33 737 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 R3HCC1Q9Y3T6 440 aaKnown RBP15.4■□□□□ 0.06
VAMP4-203ENST00000474047 C2CD2Q9Y426 696 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 ZNF233A6NK53 670 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 C1RP00736 705 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 WEE2P0C1S8 567 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 ARPP19P56211 112 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 SNRPFP62306 86 aaKnown RBP15.4■□□□□ 0.06
VAMP4-203ENST00000474047 ZP2Q05996 745 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 EHHADHQ08426 723 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 VARS2Q5ST30 1063 aaKnown RBP15.4■□□□□ 0.06
VAMP4-203ENST00000474047 LIN9Q5TKA1 542 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 USP37Q86T82 979 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 NT5DC4Q86YG4 428 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 BRSK2Q8IWQ3 736 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 KREMEN2Q8NCW0 462 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 HDAC7Q8WUI4 952 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 PIDD1Q9HB75 910 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 TSHZ2Q9NRE2 1034 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 HSPBP1Q9NZL4 362 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 CDY1Q9Y6F8 540 aa15.4■□□□□ 0.06
VAMP4-203ENST00000474047 CCDC195A0A1B0GUA6 201 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 CLIC2O15247 247 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 KLRC4O43908 158 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 KIF20AO95235 890 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 HOXD13P35453 343 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 CYP2J2P51589 502 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 KNOP1Q1ED39 458 aaKnown RBP15.39■□□□□ 0.05
VAMP4-203ENST00000474047 CTXN3Q4LDR2 81 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 C9orf57Q5W0N0 161 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 TMEM130Q8N3G9 435 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 RDH13Q8NBN7 331 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 ZSWIM2Q8NEG5 633 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 SUSD6Q92537 303 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 AGPAT3Q9NRZ7 376 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 CHMP5Q9NZZ3 219 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 CGNQ9P2M7 1197 aaKnown RBP15.39■□□□□ 0.05
VAMP4-203ENST00000474047 MTRRQ9UBK8 725 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 HOOK1Q9UJC3 728 aaKnown RBP15.39■□□□□ 0.05
VAMP4-203ENST00000474047 PCDHB8Q9UN66 801 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 BACE2Q9Y5Z0 518 aa15.39■□□□□ 0.05
VAMP4-203ENST00000474047 ARHGEF37A1IGU5 675 aa15.38■□□□□ 0.05
VAMP4-203ENST00000474047 PAX3P23760 479 aa15.38■□□□□ 0.05
VAMP4-203ENST00000474047 STK4Q13043 487 aa15.38■□□□□ 0.05
VAMP4-203ENST00000474047 SURF1Q15526 300 aa15.38■□□□□ 0.05
VAMP4-203ENST00000474047 ZNF280DQ6N043 979 aa15.38■□□□□ 0.05
VAMP4-203ENST00000474047 GOLGA5Q8TBA6 731 aa15.38■□□□□ 0.05
VAMP4-203ENST00000474047 NR2E1Q9Y466 385 aa15.38■□□□□ 0.05
VAMP4-203ENST00000474047 TMEM191BP0C7N4 346 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 SP100P23497 879 aaPredicted RBP15.37■□□□□ 0.05
VAMP4-203ENST00000474047 ELF1P32519 619 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 LILRA4P59901 499 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 YWHAHQ04917 246 aaPredicted RBP15.37■□□□□ 0.05
VAMP4-203ENST00000474047 FAM160A1Q05DH4 1040 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 RAB33AQ14088 237 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 BMT2Q1RMZ1 405 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 LILRA6Q6PI73 481 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 GPR149Q86SP6 731 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 XXYLT1Q8NBI6 393 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 PDE11AQ9HCR9 933 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 CD320Q9NPF0 282 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 CDH22Q9UJ99 828 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 VWA8A3KMH1 1905 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 PLXNA3P51805 1871 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 PPEF2O14830 753 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 ADAM12O43184 909 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 TGFB1I1O43294 461 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 EXOC3O60645 756 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 ODC1P11926 461 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 DPYDQ12882 1025 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 PPM1LQ5SGD2 360 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 C15orf39Q6ZRI6 1047 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 METTL23Q86XA0 190 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 CBWD2Q8IUF1 395 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 EFCAB13Q8IY85 973 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 SMG7Q92540 1137 aaKnown RBP15.37■□□□□ 0.05
VAMP4-203ENST00000474047 ANKRD36BP1Q96IX9 119 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 ZNF560Q96MR9 790 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 FNBP1Q96RU3 617 aa15.37■□□□□ 0.05
VAMP4-203ENST00000474047 POMKQ9H5K3 350 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms