RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 ITIH2P19823 946 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 SFNP31947 248 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 KRT76Q01546 638 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 ARHGEF16Q5VV41 709 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 SWSAP1Q6NVH7 229 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 ANKRD42Q8N9B4 389 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 GDAP1Q8TB36 358 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 SPIRE2Q8WWL2 714 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 ATG4CQ96DT6 458 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 C9orf72Q96LT7 481 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 SERPINB12Q96P63 405 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 C11orf70Q9BRQ4 267 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 KIAA1683Q9H0B3 1180 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 ARHGAP28Q9P2N2 729 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 CLEC11AQ9Y240 323 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 HLA-DRAP01903 254 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 C4BPAP04003 597 aaKnown RBP11.64□□□□□ -0.55
C9orf3-214ENST00000473778 GTF2H1P32780 548 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 ADCY8P40145 1251 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 CLDN10P78369 228 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 MAMLD1Q13495 774 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 NEDD9Q14511 834 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 SNCBQ16143 134 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 ZACNQ401N2 412 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 HIBCHQ6NVY1 386 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-214ENST00000473778 TAOK1Q7L7X3 1001 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 VSIG10LQ86VR7 867 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 CCDC50Q8IVM0 306 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 ANKS4BQ8N8V4 417 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 ANKLE1Q8NAG6 615 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 P3H4Q92791 437 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 MIEF2Q96C03 454 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 RPAP3Q9H6T3 665 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-214ENST00000473778 AVENQ9NQS1 362 aaPredicted RBP11.64□□□□□ -0.55
C9orf3-214ENST00000473778 C1orf112Q9NSG2 853 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 EURLQ9NYK6 297 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 SAMD15Q9P1V8 674 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 FZD1Q9UP38 647 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 PCDHB2Q9Y5E7 798 aa11.64□□□□□ -0.55
C9orf3-214ENST00000473778 LCTP09848 1927 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 VWA5AO00534 786 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 PROSCO94903 275 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 NR3C2P08235 984 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 ELF1P32519 619 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 NF2P35240 595 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 GJC1P36383 396 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 RPL7AP62424 266 aaKnown RBP11.63□□□□□ -0.55
C9orf3-214ENST00000473778 KCNJ2P63252 427 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 NOMO3P69849 1222 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 MGAT5Q09328 741 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 PTP4A2Q12974 167 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 ZKSCAN8Q15776 578 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-214ENST00000473778 SEZ6Q53EL9 994 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 BRDTQ58F21 947 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-214ENST00000473778 NUGGCQ68CJ6 796 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 LPAR1Q92633 364 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 BICD1Q96G01 975 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 SCLT1Q96NL6 688 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 TCEAL9Q9UHQ7 104 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 THAP12O43422 761 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 ZSCAN5DPP0CG00 497 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 KRT10P13645 584 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 ATF2P15336 505 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 KCNA3P22001 575 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 GCAP28676 217 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 NSFP46459 744 aaKnown RBP11.63□□□□□ -0.55
C9orf3-214ENST00000473778 PRKCEQ02156 737 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 CXCL9Q07325 125 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 E2F5Q15329 346 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 TBC1D1Q86TI0 1168 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-214ENST00000473778 MTMR14Q8NCE2 650 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 ATL2Q8NHH9 583 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 RMDN2Q96LZ7 410 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 TRAIPQ9BWF2 469 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 FHDC1Q9C0D6 1143 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-214ENST00000473778 POLR3FQ9H1D9 316 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-214ENST00000473778 SEPT9Q9UHD8 586 aaPredicted RBP11.63□□□□□ -0.55
C9orf3-214ENST00000473778 ANAPC5Q9UJX4 755 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 PNMA3Q9UL41 463 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 NAALADL1Q9UQQ1 740 aa11.63□□□□□ -0.55
C9orf3-214ENST00000473778 TTLL13PA6NNM8 815 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 PI4K2BG5E9Z4 385 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 ATP6V1G2O95670 118 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 ITGBL1O95965 494 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-214ENST00000473778 ETS1P14921 441 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 BRAFP15056 766 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 TNNI1P19237 187 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 ATP4AP20648 1035 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 GARTP22102 1010 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 KLRC2P26717 231 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 RDXP35241 583 aaKnown RBP11.62□□□□□ -0.55
C9orf3-214ENST00000473778 NCALDP61601 193 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 SP2Q02086 613 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 ZNF252P-AS1Q0IIN9 211 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 FASTKD3Q14CZ7 662 aaKnown RBP11.62□□□□□ -0.55
C9orf3-214ENST00000473778 PREPLQ4J6C6 727 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-214ENST00000473778 HP1BP3Q5SSJ5 553 aaPredicted RBP11.62□□□□□ -0.55
C9orf3-214ENST00000473778 WLSQ5T9L3 541 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 TXNRD3NBQ6F5E7 133 aa11.62□□□□□ -0.55
C9orf3-214ENST00000473778 TMEM270Q6UE05 265 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms