RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 MROH7Q68CQ1 1323 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 MYH11P35749 1972 aa6.49□□□□□ -1.37
HERC4-209ENST00000473533 UBAP1LF5GYI3 381 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 SPAG6O75602 509 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 GARTP22102 1010 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 CA4P22748 312 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 TBXAS1P24557 533 aaPredicted RBP6.48□□□□□ -1.37
HERC4-209ENST00000473533 IVDP26440 423 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 PTPN7P35236 360 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 SNX1Q13596 522 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 SNRNP35Q16560 246 aaKnown RBP6.48□□□□□ -1.37
HERC4-209ENST00000473533 APOBEC3HQ6NTF7 200 aaKnown RBP6.48□□□□□ -1.37
HERC4-209ENST00000473533 ZNF746Q6NUN9 644 aaPredicted RBP6.48□□□□□ -1.37
HERC4-209ENST00000473533 ERICH1Q86X53 443 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 PALB2Q86YC2 1186 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 ATP11CQ8NB49 1132 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 SPIRE2Q8WWL2 714 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 DNAJC9Q8WXX5 260 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 ZNF570Q96NI8 536 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 TRIM55Q9BYV6 548 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 MYLK2Q9H1R3 596 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 TLE6Q9H808 572 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.48□□□□□ -1.37
HERC4-209ENST00000473533 SCOCQ9UIL1 159 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 MTO1Q9Y2Z2 717 aaKnown RBP6.48□□□□□ -1.37
HERC4-209ENST00000473533 ATRNL1Q5VV63 1379 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 SLX4Q8IY92 1834 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 A8MXQ7 604 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 FESP07332 822 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 HOXA13P31271 388 aaPredicted RBP6.48□□□□□ -1.37
HERC4-209ENST00000473533 ECE1P42892 770 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 MXRA7P84157 204 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 C1QBPQ07021 282 aaKnown RBP6.48□□□□□ -1.37
HERC4-209ENST00000473533 TBCCQ15814 346 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 CDCA2Q69YH5 1023 aaPredicted RBP6.48□□□□□ -1.37
HERC4-209ENST00000473533 B3GNT9Q6UX72 402 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 MFN1Q8IWA4 741 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 C4orf19Q8IY42 314 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 MAML1Q92585 1016 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 TRAPPC9Q96Q05 1148 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 TSC22D3Q99576 134 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 WDR18Q9BV38 432 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 RANBP17Q9H2T7 1088 aaKnown RBP6.48□□□□□ -1.37
HERC4-209ENST00000473533 SAYSD1Q9NPB0 183 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 SERPINA10Q9UK55 444 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 FEM1BQ9UK73 627 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 ANGPTL2Q9UKU9 493 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 LRCH1Q9Y2L9 728 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 LY75O60449 1722 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 NFASCO94856 1347 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 TAF1LQ8IZX4 1826 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 A6NHS1 94 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 ANKRD63C9JTQ0 380 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 TGDSO95455 350 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 CALB1P05937 261 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 NPR1P16066 1061 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 CHKAP35790 457 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 MOGSQ13724 837 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 GSTA3Q16772 222 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 STRIP1Q5VSL9 837 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 AADACL2Q6P093 401 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 SLC47A2Q86VL8 602 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 SESTD1Q86VW0 696 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 LONP2Q86WA8 852 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 CCDC125Q86Z20 511 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 MAP4K3Q8IVH8 894 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 KIF2BQ8N4N8 673 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.48□□□□□ -1.37
HERC4-209ENST00000473533 PARD3BQ8TEW8 1205 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 MCUR1Q96AQ8 359 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 MFSD14AQ96MC6 490 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 VPS11Q9H270 941 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 PCIF1Q9H4Z3 704 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 VPS37BQ9H9H4 285 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 PARVAQ9NVD7 372 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 EURLQ9NYK6 297 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 EFR3BQ9Y2G0 817 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 NEU2Q9Y3R4 380 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 IKBKGQ9Y6K9 419 aa6.48□□□□□ -1.37
HERC4-209ENST00000473533 LTBP1Q14766 1721 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 RBBP6Q7Z6E9 1792 aaKnown RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 CCDC189A1A4V9 331 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 ECE2O60344 883 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 HAUS5O94927 633 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 IL1BP01584 269 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 GNAZP19086 355 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 RBM5P52756 815 aaKnown RBP eCLIP6.47□□□□□ -1.37
HERC4-209ENST00000473533 ARL4CP56559 192 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 GEMIN4P57678 1058 aaKnown RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 PSMC5P62195 406 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 KRT76Q01546 638 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 PPARDQ03181 441 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 DYNC1I2Q13409 638 aaKnown RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 XRRA1Q6P2D8 792 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 SLC30A9Q6PML9 568 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 GPD1LQ8N335 351 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 HELQQ8TDG4 1101 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 ASAP3Q8TDY4 903 aa6.47□□□□□ -1.37
HERC4-209ENST00000473533 DDX27Q96GQ7 796 aaKnown RBP6.47□□□□□ -1.37
HERC4-209ENST00000473533 RMDN2Q96LZ7 410 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms