RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 TMEM130Q8N3G9 435 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 BEST2Q8NFU1 509 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 ASB7Q9H672 318 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 MAGEF1Q9HAY2 307 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 FAM13BQ9NYF5 915 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 RCOR1Q9UKL0 485 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 SORCS3Q9UPU3 1222 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 DERAQ9Y315 318 aa24.49■■□□□ 1.51
PTP4A1-203ENST00000473334 HNRNPA1P09651 372 aaKnown RBP eCLIP24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 ADSSP30520 456 aa24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 GUCY2FP51841 1108 aa24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 POU5F1Q01860 360 aaKnown RBP24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 MRPL58Q14197 206 aaKnown RBP24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 PPM1LQ5SGD2 360 aa24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 RESP18Q5W5W9 173 aa24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 SLC8B1Q6J4K2 584 aa24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 APPL2Q8NEU8 664 aa24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 FGFBP2Q9BYJ0 223 aa24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 RAPGEFL1Q9UHV5 662 aa24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 PCDHB8Q9UN66 801 aa24.48■■□□□ 1.51
PTP4A1-203ENST00000473334 MYO10Q9HD67 2058 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 POLR2DO15514 142 aaKnown RBP24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 TBC1D4O60343 1298 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 NFICP08651 508 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 ASIC1P78348 528 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 SIGLEC14Q08ET2 396 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 TMEM132DQ14C87 1099 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 UVSSAQ2YD98 709 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 CNNM4Q6P4Q7 775 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 SYCP3Q8IZU3 236 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 SLC7A14Q8TBB6 771 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 LIMD1Q9UGP4 676 aa24.47■■□□□ 1.51
PTP4A1-203ENST00000473334 TMEM221A6NGB7 291 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 M0QZQ0 153 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 M0R296 226 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 AARSP49588 968 aaKnown RBP eCLIP24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 ROR1Q01973 937 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 MTMR3Q13615 1198 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 ZNF280DQ6N043 979 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 CRELD2Q6UXH1 353 aaPredicted RBP24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 HFE2Q6ZVN8 426 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 STXBP4Q6ZWJ1 553 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 RTL10Q7L3V2 364 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 TMEM206Q9H813 350 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 FBXL5Q9UKA1 691 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 ZDHHC9Q9Y397 364 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 HCN4Q9Y3Q4 1203 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 C2CD2Q9Y426 696 aa24.46■■□□□ 1.51
PTP4A1-203ENST00000473334 N4BP1O75113 896 aaKnown RBP24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 XYLBO75191 536 aa24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 PRPF6O94906 941 aaKnown RBP24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 ASGR2P07307 311 aa24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 GARTP22102 1010 aa24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 GBP2P32456 591 aaPredicted RBP24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 CTXN3Q4LDR2 81 aa24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 UBALD2Q8IYN6 164 aa24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 ZNF461Q8TAF7 563 aa24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 C7orf25Q9BPX7 421 aa24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 PYM1Q9BRP8 204 aaKnown RBP24.45■■□□□ 1.5
PTP4A1-203ENST00000473334 WDR27A2RRH5 827 aa24.44■■□□□ 1.5
PTP4A1-203ENST00000473334 PPEF2O14830 753 aa24.44■■□□□ 1.5
PTP4A1-203ENST00000473334 CCL16O15467 120 aa24.44■■□□□ 1.5
PTP4A1-203ENST00000473334 IL18RAPO95256 599 aa24.44■■□□□ 1.5
PTP4A1-203ENST00000473334 POU2F2P09086 479 aa24.44■■□□□ 1.5
PTP4A1-203ENST00000473334 BMP8AQ7Z5Y6 402 aa24.44■■□□□ 1.5
PTP4A1-203ENST00000473334 FAM213AQ9BRX8 229 aa24.44■■□□□ 1.5
PTP4A1-203ENST00000473334 DOCK8Q8NF50 2099 aa24.44■■□□□ 1.5
PTP4A1-203ENST00000473334 ABLIM3O94929 683 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 LDHAP00338 332 aaKnown RBP24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 PAX3P23760 479 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 ARPP19P56211 112 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 KRT85P78386 507 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 YWHAHQ04917 246 aaPredicted RBP24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 C9orf57Q5W0N0 161 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 DSTYKQ6XUX3 929 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 GET4Q7L5D6 327 aaPredicted RBP24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 GRASPQ7Z6J2 395 aaPredicted RBP24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 GLIS3Q8NEA6 775 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 HPS3Q969F9 1004 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 SAAL1Q96ER3 474 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 ASIC4Q96FT7 647 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 MYADMQ96S97 322 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.43■■□□□ 1.52e-9■■■□□ 18.6
PTP4A1-203ENST00000473334 KCNH3Q9ULD8 1083 aa24.43■■□□□ 1.5
PTP4A1-203ENST00000473334 DOCK6Q96HP0 2047 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 ANO9A1A5B4 782 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 EIF3DO15371 548 aaKnown RBP eCLIP24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 ATF2P15336 505 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 ELF1P32519 619 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 FAM26FQ5R3K3 315 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 TPGS2Q68CL5 300 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 UNC13DQ70J99 1090 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 NT5DC4Q86YG4 428 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 BRSK2Q8IWQ3 736 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 LEO1Q8WVC0 666 aaPredicted RBP24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 SPATA32Q96LK8 384 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 MFSD14AQ96MC6 490 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 CBWD1Q9BRT8 395 aa24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 OXCT2Q9BYC2 517 aaPredicted RBP24.42■■□□□ 1.5
PTP4A1-203ENST00000473334 EPS15L1Q9UBC2 864 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms