RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 PCDHB4Q9Y5E5 795 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 SQORQ9Y6N5 450 aa15.67■□□□□ 0.1
HIF3A-206ENST00000472815 RCCD1A6NED2 376 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 URI1O94763 535 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-206ENST00000472815 CST3P01034 146 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-206ENST00000472815 ITGB3P05106 788 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 CTSHP09668 335 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 GZMAP12544 262 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 ZSCAN20P17040 1043 aaPredicted RBP15.66■□□□□ 0.1
HIF3A-206ENST00000472815 CDR2Q01850 454 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 MYO1EQ12965 1108 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 SPOPLQ6IQ16 392 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 RPUSD2Q8IZ73 545 aaKnown RBP15.66■□□□□ 0.1
HIF3A-206ENST00000472815 C1orf127Q8N9H9 656 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 SH3TC2Q8TF17 1288 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 EIF2AQ9BY44 585 aaKnown RBP15.66■□□□□ 0.1
HIF3A-206ENST00000472815 VRTNQ9H8Y1 702 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 APOBEC3GQ9HC16 384 aaKnown RBP15.66■□□□□ 0.1
HIF3A-206ENST00000472815 DPP3Q9NY33 737 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 TRIM10Q9UDY6 481 aa15.66■□□□□ 0.1
HIF3A-206ENST00000472815 NOC2LQ9Y3T9 749 aaKnown RBP15.66■□□□□ 0.1
HIF3A-206ENST00000472815 A0A0A6YYK5 440 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 A0A1W2PQ45 241 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 A0A1W2PQY0 241 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 ANO9A1A5B4 782 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 SGPL1O95470 568 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 STAU1O95793 577 aaKnown RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 MGAT3Q09327 533 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 TMEM270Q6UE05 265 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 SLC47A2Q86VL8 602 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 LNX1Q8TBB1 728 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 FAM84AQ96KN4 292 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 PDCL3Q9H2J4 239 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 CNTN3Q9P232 1028 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 NOCTQ9UK39 431 aaKnown RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 ST3GAL5Q9UNP4 418 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 CNTN6Q9UQ52 1028 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 GRIN2DO15399 1336 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 PDCD11Q14690 1871 aaKnown RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 TRIP11Q15643 1979 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 ANKRD62A6NC57 917 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 RTN2O75298 545 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 RECQL4O94761 1208 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 ATF7P17544 494 aaPredicted RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 NFX1Q12986 1120 aaKnown RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 TRIM72Q6ZMU5 477 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 NOP9Q86U38 636 aaKnown RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 ARID3AQ99856 593 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 XYLT2Q9H1B5 865 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 NXF3Q9H4D5 531 aaKnown RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 PARP2Q9UGN5 583 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 UBQLN1Q9UMX0 589 aaKnown RBP15.65■□□□□ 0.1
HIF3A-206ENST00000472815 NENFQ9UMX5 172 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 PHF24Q9UPV7 400 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 JRKLQ9Y4A0 524 aa15.65■□□□□ 0.1
HIF3A-206ENST00000472815 DNM1LO00429 736 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 TLR3O15455 904 aaKnown RBP15.64■□□□□ 0.09
HIF3A-206ENST00000472815 ABL1P00519 1130 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 CD4P01730 458 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 CHRNA1P02708 482 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 TMEM253P0C7T8 217 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 ACO1P21399 889 aaKnown RBP15.64■□□□□ 0.09
HIF3A-206ENST00000472815 GNA15P30679 374 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 RAB27AP51159 221 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 PAK2Q13177 524 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 WDR72Q3MJ13 1102 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 FAM26DQ5JW98 314 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 RBBP8NLQ8NC74 664 aaPredicted RBP15.64■□□□□ 0.09
HIF3A-206ENST00000472815 MYRIPQ8NFW9 859 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 SLC20A1Q8WUM9 679 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 L2HGDHQ9H9P8 463 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 CYP3A43Q9HB55 503 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 SIX4Q9UIU6 781 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 TFR2Q9UP52 801 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 AGAP1Q9UPQ3 857 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 IPPQ9Y573 584 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 DUSP10Q9Y6W6 482 aa15.64■□□□□ 0.09
HIF3A-206ENST00000472815 RIOK3O14730 519 aaKnown RBP15.63■□□□□ 0.09
HIF3A-206ENST00000472815 SKIP12755 728 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 POLR2BP30876 1174 aaKnown RBP15.63■□□□□ 0.09
HIF3A-206ENST00000472815 TNNC1P63316 161 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 UBXN11Q5T124 520 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 TAF3Q5VWG9 929 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 ALKAL1Q6UXT8 129 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 RHOT2Q8IXI1 618 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 SLC43A3Q8NBI5 491 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 HPDLQ96IR7 371 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 APOL6Q9BWW8 343 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 DNAI2Q9GZS0 605 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 ISCUQ9H1K1 167 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 CISHQ9NSE2 258 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 NXF1Q9UBU9 619 aaKnown RBP15.63■□□□□ 0.09
HIF3A-206ENST00000472815 MYH10P35580 1976 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 ARVCFO00192 962 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 KCNE1P15382 129 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 CYP3A5P20815 502 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 NOP2P46087 812 aaKnown RBP15.63■□□□□ 0.09
HIF3A-206ENST00000472815 GALCP54803 685 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 FMO1Q01740 532 aa15.63■□□□□ 0.09
HIF3A-206ENST00000472815 FBXO47Q5MNV8 452 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms