RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 GLRA4Q5JXX5 417 aa20.91■□□□□ 0.94
CHMP2B-204ENST00000472024 C9orf57Q5W0N0 161 aa20.91■□□□□ 0.94
CHMP2B-204ENST00000472024 PDXDC1Q6P996 788 aa20.91■□□□□ 0.94
CHMP2B-204ENST00000472024 ARHGEF19Q8IW93 802 aa20.91■□□□□ 0.94
CHMP2B-204ENST00000472024 IMPG2Q9BZV3 1241 aa20.91■□□□□ 0.94
CHMP2B-204ENST00000472024 GPR88Q9GZN0 384 aa20.91■□□□□ 0.94
CHMP2B-204ENST00000472024 PCDH10Q9P2E7 1040 aa20.91■□□□□ 0.94
CHMP2B-204ENST00000472024 KANSL3Q9P2N6 904 aa20.91■□□□□ 0.94
CHMP2B-204ENST00000472024 AJAP1Q9UKB5 411 aaPredicted RBP20.91■□□□□ 0.94
CHMP2B-204ENST00000472024 PCDHB7Q9Y5E2 793 aa20.91■□□□□ 0.94
CHMP2B-204ENST00000472024 PAX3P23760 479 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 TBXAS1P24557 533 aaPredicted RBP20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 POLR2BP30876 1174 aaKnown RBP20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 RPL9P32969 192 aaKnown RBP20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 KRT9P35527 623 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 DEKP35659 375 aaKnown RBP20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 SCNN1GP51170 649 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 CDK17Q00537 523 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 DSC1Q08554 894 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 MEA1Q16626 185 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 FMNL3Q8IVF7 1028 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 UBR7Q8N806 425 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 ZNF397Q8NF99 534 aaPredicted RBP20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 OR8K1Q8NGG5 319 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 SHC3Q92529 594 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 KREMEN1Q96MU8 473 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 ABHD10Q9NUJ1 306 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 AIPL1Q9NZN9 384 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 DNAJC12Q9UKB3 198 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 NUB1Q9Y5A7 615 aa20.9■□□□□ 0.94
CHMP2B-204ENST00000472024 COL4A6Q14031 1691 aa20.89■□□□□ 0.94
CHMP2B-204ENST00000472024 PNPLA4P41247 253 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 GUCY2FP51841 1108 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 FPGSQ05932 587 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 ZNF699Q32M78 642 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 NOMO2Q5JPE7 1267 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 GJB7Q6PEY0 223 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 C16orf59Q7L2K0 433 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 LIMS2Q7Z4I7 341 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 C7orf61Q8IZ16 206 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 TATDN2Q93075 761 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 UROC1Q96N76 676 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 PI4K2AQ9BTU6 479 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 BCO2Q9BYV7 579 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 NIF3L1Q9GZT8 377 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 AGAP1Q9UPQ3 857 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 CNTN6Q9UQ52 1028 aa20.89■□□□□ 0.93
CHMP2B-204ENST00000472024 F8VZ95 297 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 MFAP3P55082 362 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 ADKP55263 362 aaKnown RBP20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 MLLT1Q03111 559 aaPredicted RBP20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 TUSC3Q13454 348 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 CUL2Q13617 745 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 CACNA2D4Q7Z3S7 1137 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 TMEM139Q8IV31 216 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 LRRC8AQ8IWT6 810 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 RNF169Q8NCN4 708 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 URGCPQ8TCY9 931 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 BADQ92934 168 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 TOP1MTQ969P6 601 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 DDX27Q96GQ7 796 aaKnown RBP20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 HPDLQ96IR7 371 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 ZNF560Q96MR9 790 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 CASD1Q96PB1 797 aa20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 RC3H2Q9HBD1 1191 aaKnown RBP20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 UBE2TQ9NPD8 197 aaPredicted RBP20.88■□□□□ 0.93
CHMP2B-204ENST00000472024 LRRC53A6NM62 1247 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 EVI5O60447 810 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 FAM163BP0C2L3 166 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 ACO1P21399 889 aaKnown RBP20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 ASPAP45381 313 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 AARSP49588 968 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 WDR5P61964 334 aaKnown RBP20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 MYO1EQ12965 1108 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 SPOPLQ6IQ16 392 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 PSRC1Q6PGN9 363 aaPredicted RBP20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 CCDC112Q8NEF3 446 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 CPLX3Q8WVH0 158 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 MRPL9Q9BYD2 267 aaKnown RBP20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 CYP3A43Q9HB55 503 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 NLRC4Q9NPP4 1024 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 TBC1D13Q9NVG8 400 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 GDAP2Q9NXN4 497 aa20.87■□□□□ 0.93
CHMP2B-204ENST00000472024 CCDC85CA6NKD9 419 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 TMEM189-UBE2V1I3L0A0 370 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 PPEF2O14830 753 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 AMHP03971 560 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 KRT19P08727 400 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 FGFR1P11362 822 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 PRKCIP41743 596 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 RGS19P49795 217 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 LRMPQ12912 555 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 DRAP1Q14919 205 aaPredicted RBP20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 UPP1Q16831 310 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 ZNF667Q5HYK9 610 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 E4F1Q66K89 784 aaPredicted RBP20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 WDR59Q6PJI9 974 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 RRAGAQ7L523 313 aa20.86■□□□□ 0.93
CHMP2B-204ENST00000472024 FAM71AQ8IYT1 594 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms