RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 TTYH3Q9C0H2 523 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 VRTNQ9H8Y1 702 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 APEX2Q9UBZ4 518 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 AGAP1Q9UPQ3 857 aa12.51□□□□□ -0.41
FN1-217ENST00000471193 TRIP11Q15643 1979 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 CASTOR2A6NHX0 329 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 PODXLO00592 558 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 NOL4O94818 638 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 DDHD2O94830 711 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 GJB5O95377 273 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 RFX1P22670 979 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 RPL9P32969 192 aaKnown RBP12.5□□□□□ -0.41
FN1-217ENST00000471193 PNPLA4P41247 253 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 CLCNKBP51801 687 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 HTRA4P83105 476 aaPredicted RBP12.5□□□□□ -0.41
FN1-217ENST00000471193 RNASELQ05823 741 aaKnown RBP12.5□□□□□ -0.41
FN1-217ENST00000471193 TRIM14Q14142 442 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 UPP1Q16831 310 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 SGSM1Q2NKQ1 1148 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 PAN2Q504Q3 1202 aaKnown RBP12.5□□□□□ -0.41
FN1-217ENST00000471193 FIGNQ5HY92 759 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 C9orf50Q5SZB4 431 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 KLHDC7AQ5VTJ3 777 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 ZNF280BQ86YH2 543 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 ARHGEF19Q8IW93 802 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 COLGALT2Q8IYK4 626 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 CMTR2Q8IYT2 770 aaKnown RBP12.5□□□□□ -0.41
FN1-217ENST00000471193 CCDC150Q8NCX0 1101 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 NEK11Q8NG66 645 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 ANP32BQ92688 251 aaKnown RBP12.5□□□□□ -0.41
FN1-217ENST00000471193 IQCDQ96DY2 449 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
FN1-217ENST00000471193 NT5C1BQ96P26 610 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 GDF15Q99988 308 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 PI4K2AQ9BTU6 479 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 APOBEC3GQ9HC16 384 aaKnown RBP12.5□□□□□ -0.41
FN1-217ENST00000471193 FAM207AQ9NSI2 230 aaPredicted RBP12.5□□□□□ -0.41
FN1-217ENST00000471193 HCSTQ9UBK5 93 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 CACNG4Q9UBN1 327 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 FBXL5Q9UKA1 691 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 DAAM1Q9Y4D1 1078 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 SLC4A7Q9Y6M7 1214 aa12.5□□□□□ -0.41
FN1-217ENST00000471193 GYPCP04921 128 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 UCHL3P15374 230 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 TRIM21P19474 475 aaKnown RBP12.49□□□□□ -0.41
FN1-217ENST00000471193 TAF6P49848 677 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 LRMPQ12912 555 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 MYO1EQ12965 1108 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 TBX2Q13207 712 aaPredicted RBP12.49□□□□□ -0.41
FN1-217ENST00000471193 WDR44Q5JSH3 913 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 SPOPLQ6IQ16 392 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 PHLDB3Q6NSJ2 640 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 FAM117BQ6P1L5 589 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 HERC6Q8IVU3 1022 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 C3orf58Q8NDZ4 430 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 ELMO3Q96BJ8 720 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 DDX27Q96GQ7 796 aaKnown RBP12.49□□□□□ -0.41
FN1-217ENST00000471193 HPDLQ96IR7 371 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 PDLIM2Q96JY6 352 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 FAM193BQ96PV7 902 aaPredicted RBP12.49□□□□□ -0.41
FN1-217ENST00000471193 PAAF1Q9BRP4 392 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 TMEM175Q9BSA9 504 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 NUP58Q9BVL2 599 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 NAA15Q9BXJ9 866 aaKnown RBP12.49□□□□□ -0.41
FN1-217ENST00000471193 NIF3L1Q9GZT8 377 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 CEP72Q9P209 647 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 DNAJB4Q9UDY4 337 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 AJAP1Q9UKB5 411 aaPredicted RBP12.49□□□□□ -0.41
FN1-217ENST00000471193 R3HCC1Q9Y3T6 440 aaKnown RBP12.49□□□□□ -0.41
FN1-217ENST00000471193 NUB1Q9Y5A7 615 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.49□□□□□ -0.41
FN1-217ENST00000471193 FHOD1Q9Y613 1164 aa12.49□□□□□ -0.41
FN1-217ENST00000471193 A0A1W2PQJ5 194 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 H0YGN5 161 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 TMEM189-UBE2V1I3L0A0 370 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 SPTLC1O15269 473 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 ATP2A2P16615 1042 aaKnown RBP12.48□□□□□ -0.41
FN1-217ENST00000471193 ASPAP45381 313 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 AARSP49588 968 aaKnown RBP eCLIP12.48□□□□□ -0.41
FN1-217ENST00000471193 GCNT1Q02742 428 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 SV2CQ496J9 727 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 ZNF667Q5HYK9 610 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 IQCEQ6IPM2 695 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 GJB7Q6PEY0 223 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 PPM1KQ8N3J5 372 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
FN1-217ENST00000471193 TATDN2Q93075 761 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 FAXDC2Q96IV6 333 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 RNPC3Q96LT9 517 aaKnown RBP12.48□□□□□ -0.41
FN1-217ENST00000471193 YME1L1Q96TA2 773 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 CWH43Q9H720 699 aa12.48□□□□□ -0.41
FN1-217ENST00000471193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.48□□□□□ -0.41
FN1-217ENST00000471193 TSC2P49815 1807 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 CLSTN1O94985 981 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 KIF4AO95239 1232 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 PAX3P23760 479 aa12.47□□□□□ -0.41
FN1-217ENST00000471193 TBXAS1P24557 533 aaPredicted RBP12.47□□□□□ -0.41
FN1-217ENST00000471193 IGFBP6P24592 240 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms