RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 GMPSP49915 693 aaPredicted RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 DRG2P55039 364 aaKnown RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 DLG4P78352 724 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 GCNT1Q02742 428 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 CALCOCO2Q13137 446 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 IRF5Q13568 498 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 SLMAPQ14BN4 828 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 EMC2Q15006 297 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 STXBP2Q15833 593 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 KRT71Q3SY84 523 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 TTMPQ5BVD1 217 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 FAM160B1Q5W0V3 765 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 DENND2CQ68D51 928 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 ACAD10Q6JQN1 1059 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 SWSAP1Q6NVH7 229 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 SYDE1Q6ZW31 735 aaPredicted RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 TRMT1LQ7Z2T5 733 aaKnown RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 ARMC9Q7Z3E5 817 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 NOP9Q86U38 636 aaKnown RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 CBWD2Q8IUF1 395 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 EXOC8Q8IYI6 725 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 DNERQ8NFT8 737 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 PARD3BQ8TEW8 1205 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 SLC20A1Q8WUM9 679 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 SLC7A3Q8WY07 619 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 MAGOHBQ96A72 148 aaKnown RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 ARHGEF26Q96DR7 871 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 INSM2Q96T92 566 aaPredicted RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 DPH5Q9H2P9 285 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 IKZF4Q9H2S9 585 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 PLEKHA4Q9H4M7 779 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 BCAS3Q9H6U6 928 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 TMBIM4Q9HC24 238 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 GPRC5CQ9NQ84 441 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 CYP26B1Q9NR63 512 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 HOMER3Q9NSC5 361 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 CNOT7Q9UIV1 285 aaKnown RBP8.55□□□□□ -1.04
SMC4-212ENST00000470240 PPME1Q9Y570 386 aa8.55□□□□□ -1.04
SMC4-212ENST00000470240 ATXN2Q99700 1313 aaKnown RBP8.54□□□□□ -1.04
SMC4-212ENST00000470240 MYH9P35579 1960 aaKnown RBP8.54□□□□□ -1.04
SMC4-212ENST00000470240 ZSCAN5CA6NGD5 496 aaPredicted RBP8.54□□□□□ -1.04
SMC4-212ENST00000470240 NDC80O14777 642 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 CYP26A1O43174 497 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 PPFIA2O75334 1257 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 SGPL1O95470 568 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 ECEL1O95672 775 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 GAS8O95995 478 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 ITGA4P13612 1032 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 TNNI1P19237 187 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 COMTP21964 271 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 KCNA3P22001 575 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 RDXP35241 583 aaKnown RBP8.54□□□□□ -1.04
SMC4-212ENST00000470240 PTGIRP43119 386 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 NAMPTP43490 491 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 AP3M2P53677 418 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 HMGCS2P54868 508 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 ACTR2P61160 394 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 PSMD6Q15008 389 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 PPP1R7Q15435 360 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 MTERF2Q49AM1 385 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 TBC1D10BQ4KMP7 808 aaPredicted RBP8.54□□□□□ -1.04
SMC4-212ENST00000470240 NAA35Q5VZE5 725 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 KCTD16Q68DU8 428 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 ANO5Q75V66 913 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 CYFIP1Q7L576 1253 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 TMC3Q7Z5M5 1100 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 JAMLQ86YT9 394 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 CCDC105Q8IYK2 499 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 BBOF1Q8ND07 529 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 C3orf20Q8ND61 904 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 PPM1EQ8WY54 764 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 SEC14L1Q92503 715 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 ARL8AQ96BM9 186 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 ZBTB9Q96C00 473 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 FAM167AQ96KS9 214 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 FBXL18Q96ME1 805 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 FAM213AQ9BRX8 229 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 ERP44Q9BS26 406 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 TRIM31Q9BZY9 425 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 MRPL47Q9HD33 250 aaKnown RBP8.54□□□□□ -1.04
SMC4-212ENST00000470240 AVENQ9NQS1 362 aaPredicted RBP8.54□□□□□ -1.04
SMC4-212ENST00000470240 ZNF302Q9NR11 478 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 NRBP2Q9NSY0 501 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 TAS2R14Q9NYV8 317 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 BCCIPQ9P287 314 aaKnown RBP eCLIP8.54□□□□□ -1.04
SMC4-212ENST00000470240 CNOT8Q9UFF9 292 aaKnown RBP8.54□□□□□ -1.04
SMC4-212ENST00000470240 PCYOX1Q9UHG3 505 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 ZNF112Q9UJU3 913 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 NOCTQ9UK39 431 aaKnown RBP8.54□□□□□ -1.04
SMC4-212ENST00000470240 PCDHB2Q9Y5E7 798 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 SCINQ9Y6U3 715 aa8.54□□□□□ -1.04
SMC4-212ENST00000470240 COL11A1P12107 1806 aaPredicted RBP8.54□□□□□ -1.04
SMC4-212ENST00000470240 KIAA1217Q5T5P2 1943 aa8.53□□□□□ -1.04
SMC4-212ENST00000470240 SPATA31C2B4DYI2 1134 aa8.53□□□□□ -1.04
SMC4-212ENST00000470240 TISP43B9A030 160 aa8.53□□□□□ -1.04
SMC4-212ENST00000470240 ANKRD63C9JTQ0 380 aa8.53□□□□□ -1.04
SMC4-212ENST00000470240 K7ERI5 159 aa8.53□□□□□ -1.04
SMC4-212ENST00000470240 MYO1CO00159 1063 aa8.53□□□□□ -1.04
SMC4-212ENST00000470240 TULP2O00295 520 aa8.53□□□□□ -1.04
SMC4-212ENST00000470240 ATP9AO75110 1047 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms