RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 EML1O00423 815 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 MSH4O15457 936 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 ICMTO60725 284 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 CYP3A4P08684 503 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 SRGAP2CP0DJJ0 459 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 CALM1P0DP23 149 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 CALM2P0DP24 149 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 CALM3P0DP25 149 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 GSPT1P15170 499 aaKnown RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 CEBPBP17676 345 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 AKAP5P24588 427 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 NOS2P35228 1153 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 CCR2P41597 374 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 ADCY7P51828 1080 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 NPEPPSP55786 919 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 AASDHQ4L235 1098 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 PKDCCQ504Y2 493 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 SOWAHCQ53LP3 525 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 PRR16Q569H4 304 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 PPM1LQ5SGD2 360 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 FOXD4L5Q5VV16 416 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 TMEM214Q6NUQ4 689 aaKnown RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 PKN3Q6P5Z2 889 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 TXNDC11Q6PKC3 985 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 ZNF852Q6ZMS4 543 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 NFXL1Q6ZNB6 911 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 ANO5Q75V66 913 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 RALYLQ86SE5 291 aaKnown RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 FANCBQ8NB91 859 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 LNX1Q8TBB1 728 aaPredicted RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 SLC7A14Q8TBB6 771 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 ZDHHC1Q8WTX9 485 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 GATA6Q92908 595 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 PGBD4Q96DM1 585 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 BORCS6Q96GS4 357 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 CPB2Q96IY4 423 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 TCEANC2Q96MN5 208 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 ZSWIM3Q96MP5 696 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 NELL2Q99435 816 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 LZTS2Q9BRK4 669 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 LSM14BQ9BX40 385 aaKnown RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 NIFKQ9BYG3 293 aaKnown RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 DISC1Q9NRI5 854 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 NRBP2Q9NSY0 501 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 FNIP2Q9P278 1114 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 IPPQ9Y573 584 aa5.91□□□□□ -1.46
PTPN4-209ENST00000469511 HELZ2Q9BYK8 2649 aaKnown RBP5.91□□□□□ -1.46
PTPN4-209ENST00000469511 NBEAQ8NFP9 2946 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 PTPRDP23468 1912 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 CCDC69A6NI79 296 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 ZBTB39O15060 712 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 NCAM2O15394 837 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 LRP3O75074 770 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 MAFO75444 373 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 FOSP01100 380 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 BMP2P12643 396 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 ITGA4P13612 1032 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 GJA1P17302 382 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 SFPQP23246 707 aaKnown RBP eCLIP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 CCNE1P24864 410 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 CDC27P30260 824 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 VIPR2P41587 438 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 CTSOP43234 321 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 MAGEA9P43362 315 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 CXCL12P48061 93 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 GNAQP50148 359 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 RAB27AP51159 221 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 LIMK1P53667 647 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 PFKPQ01813 784 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 HDAC1Q13547 482 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 LAPTM4AQ15012 233 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 SART3Q15020 963 aaKnown RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 USP41Q3LFD5 358 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 FAM78AQ5JUQ0 283 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 AXDND1Q5T1B0 1012 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 C16orf46Q6P387 395 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 C19orf48Q6RUI8 117 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 MTSS1LQ765P7 747 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 KBTBD6Q86V97 674 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 CHD1LQ86WJ1 897 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 MICU3Q86XE3 530 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 CEP57Q86XR8 500 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 MAP4K3Q8IVH8 894 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 SMC5Q8IY18 1101 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 SMAP1Q8IYB5 467 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 TTC8Q8TAM2 541 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 RNF217Q8TC41 542 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 FAM3CQ92520 227 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 TMEM143Q96AN5 459 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 RSPRY1Q96DX4 576 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 MYO19Q96H55 970 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 FAM167AQ96KS9 214 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 BBC3Q96PG8 261 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 SCNM1Q9BWG6 230 aa5.9□□□□□ -1.46
PTPN4-209ENST00000469511 FAM126AQ9BYI3 521 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 NXF3Q9H4D5 531 aaKnown RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 ZNF334Q9HCZ1 680 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 POLMQ9NP87 494 aaPredicted RBP5.9□□□□□ -1.46
PTPN4-209ENST00000469511 TBC1D22BQ9NU19 505 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms