RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 CEP55Q53EZ4 464 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 ODR4Q5SWX8 454 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 GOLM1Q8NBJ4 401 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 RBBP8NLQ8NC74 664 aaPredicted RBP10.52□□□□□ -0.73
NUP50-214ENST00000469163 TTC16Q8NEE8 873 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 OR2W6PQ8NHA6 318 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 STK32AQ8WU08 396 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 FAM49AQ9H0Q0 323 aaPredicted RBP10.52□□□□□ -0.73
NUP50-214ENST00000469163 HSD3B7Q9H2F3 369 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 KCNMB3Q9NPA1 279 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 NOVA2Q9UNW9 492 aaKnown RBP10.52□□□□□ -0.73
NUP50-214ENST00000469163 SCN9AQ15858 1988 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 C5orf60A6NFR6 353 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 LRRIQ4A6NIV6 560 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 FBP2O00757 339 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 WDR46O15213 610 aaKnown RBP10.52□□□□□ -0.73
NUP50-214ENST00000469163 FGRP09769 529 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 PPP1R2P41236 205 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 TBX2Q13207 712 aaPredicted RBP10.52□□□□□ -0.73
NUP50-214ENST00000469163 SEZ6Q53EL9 994 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 PPP1R2P3Q6NXS1 205 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 RNF169Q8NCN4 708 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 STKLD1Q8NE28 680 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 CEP170P1Q96L14 293 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 PORCNQ9H237 461 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 IFT122Q9HBG6 1241 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 GABBR1Q9UBS5 961 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 PPP1R9AQ9ULJ8 1098 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 RABGAP1Q9Y3P9 1069 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 TTLL3Q9Y4R7 772 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 GPC6Q9Y625 555 aaPredicted RBP10.52□□□□□ -0.73
NUP50-214ENST00000469163 SCN7AQ01118 1682 aa10.52□□□□□ -0.73
NUP50-214ENST00000469163 NOTOA8MTQ0 251 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 PDHXO00330 501 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 PDE2AO00408 941 aaPredicted RBP10.51□□□□□ -0.73
NUP50-214ENST00000469163 MED24O75448 989 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 STAM2O75886 525 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 PRKACBP22694 351 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 COPB2P35606 906 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 PPP2R2AP63151 447 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 CNGA3Q16281 694 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 C8orf74Q6P047 294 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 FAM160B2Q86V87 743 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 LRRC49Q8IUZ0 686 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 FAM20CQ8IXL6 584 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 MDM1Q8TC05 714 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 AZIN2Q96A70 460 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 PHF12Q96QT6 1004 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 HAPLN3Q96S86 360 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 HEPHQ9BQS7 1158 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 GBA3Q9H227 469 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 QPCTLQ9NXS2 382 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 SELENONQ9NZV5 590 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 ANKFY1Q9P2R3 1169 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 OPHN1O60890 802 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 SHBGP04278 402 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 RARAP10276 462 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 GNAZP19086 355 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 NMT1P30419 496 aaKnown RBP10.51□□□□□ -0.73
NUP50-214ENST00000469163 PRCPP42785 496 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 HERVK_113P62684 666 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 TDRD12Q587J7 1177 aaKnown RBP10.51□□□□□ -0.73
NUP50-214ENST00000469163 PAF1Q8N7H5 531 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 ERLEC1Q96DZ1 483 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.51□□□□□ -0.73
NUP50-214ENST00000469163 TEKT3Q9BXF9 490 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 RAB17Q9H0T7 212 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 CNGB3Q9NQW8 809 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 NMRK1Q9NWW6 199 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 KIAA1257Q9ULG3 409 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 A0A1W2PQ27 194 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 A0A1W2PQ64 194 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 A0A1W2PQD8 194 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 TRPA1O75762 1119 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 CYP1A1P04798 512 aaPredicted RBP10.51□□□□□ -0.73
NUP50-214ENST00000469163 FAM153BP0C7A2 387 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 TPBGLP0DKB5 382 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 RTP1P59025 263 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 BNIP1Q12981 228 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 RAPGEF1Q13905 1077 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 ECM1Q16610 540 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 FAM153CQ494X1 144 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 PDXDC2PQ6P474 469 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 VPS36Q86VN1 386 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 IQCKQ8N0W5 287 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 TRAPPC12Q8WVT3 735 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 NSMCE3Q96MG7 304 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 PRPF18Q99633 342 aaKnown RBP10.51□□□□□ -0.73
NUP50-214ENST00000469163 SELENOSQ9BQE4 189 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 LXNQ9BS40 222 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 ETNK1Q9HBU6 452 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 FAM153AQ9UHL3 310 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 TFR2Q9UP52 801 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 COL4A5P29400 1685 aa10.51□□□□□ -0.73
NUP50-214ENST00000469163 BIRC5O15392 142 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 TTI1O43156 1089 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 EIF2B2P49770 351 aaKnown RBP10.5□□□□□ -0.73
NUP50-214ENST00000469163 COPS2P61201 443 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 PAK1Q13153 545 aa10.5□□□□□ -0.73
NUP50-214ENST00000469163 DCTN2Q13561 401 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms