RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 PTPRAP18433 802 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 HMGCS2P54868 508 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 DCAF15Q66K64 600 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 DDX27Q96GQ7 796 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 CEP170P1Q96L14 293 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 NTPCRQ9BSD7 190 aaKnown RBP16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 TRAIPQ9BWF2 469 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 USP15Q9Y4E8 981 aaPredicted RBP16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 MYPNQ86TC9 1320 aa16.8■□□□□ 0.28
TSPAN4-211ENST00000468468 ZBED4O75132 1171 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 CAV1Q03135 178 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 SPIRE2Q8WWL2 714 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 N4BP2L2Q92802 583 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 BICD1Q96G01 975 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 PDCD2LQ9BRP1 358 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 GINM1Q9NU53 330 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 GGT7Q9UJ14 662 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 RALAP11233 206 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 NSFP46459 744 aaKnown RBP16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 PRKG1Q13976 671 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 LMBRD2Q68DH5 695 aaPredicted RBP16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 ZNF280CQ8ND82 737 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 ZNF516Q92618 1163 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 MIEF2Q96C03 454 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 FAXDC2Q96IV6 333 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 NINJ2Q9NZG7 142 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 PCDHB2Q9Y5E7 798 aa16.79■□□□□ 0.28
TSPAN4-211ENST00000468468 OAS1P00973 400 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 MYBL1P10243 752 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 ELF1P32519 619 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 WLSQ5T9L3 541 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 ARHGEF16Q5VV41 709 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 NUGGCQ68CJ6 796 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 TBC1D1Q86TI0 1168 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 GDAP1Q8TB36 358 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 MAGEC3Q8TD91 643 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 TRIM11Q96F44 468 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 FAM118BQ9BPY3 351 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 MOV10L1Q9BXT6 1211 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 PXMP2Q9NR77 195 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 PICK1Q9NRD5 415 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 MAP3K20Q9NYL2 800 aaKnown RBP16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 GGA3Q9NZ52 723 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 GABBR1Q9UBS5 961 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 ZNF112Q9UJU3 913 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 ADGRA3Q8IWK6 1321 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 SORBS3O60504 671 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 ZC3H11AO75152 810 aaKnown RBP eCLIP16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 NEBLO76041 1014 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 BRAFP15056 766 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 NAIF1Q69YI7 327 aaPredicted RBP16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 CCDC125Q86Z20 511 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 TCP11Q8WWU5 503 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 TBK1Q9UHD2 729 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 BAIAP2L1Q9UHR4 511 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 AGAP1Q9UPQ3 857 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 PCDHA10Q9Y5I2 948 aa16.78■□□□□ 0.28
TSPAN4-211ENST00000468468 O00370 1275 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 IRF6O14896 467 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 UBOX5O94941 541 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 ATP6V1G2O95670 118 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 CENPCQ03188 943 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 ZNF677Q86XU0 584 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 CYP4X1Q8N118 509 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 SAMD3Q8N6K7 520 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 RNF146Q9NTX7 359 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 SUN1O94901 812 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 PROSCO94903 275 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 GARTP22102 1010 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 BIRC2Q13490 618 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 BAATQ14032 418 aaPredicted RBP16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 MPP2Q14168 576 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 E2F5Q15329 346 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 WDR44Q5JSH3 913 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 DLK2Q6UY11 383 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 ZNF365Q70YC5 407 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 NLRX1Q86UT6 975 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 CKAP2Q8WWK9 683 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 C17orf75Q9HAS0 396 aa16.77■□□□□ 0.28
TSPAN4-211ENST00000468468 PPP1R12AO14974 1030 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 ZNF862O60290 1169 aa16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 GH1P01241 217 aa16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 CLTAP09496 248 aa16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 HIRAP54198 1017 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 BPIFB4P59827 614 aa16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 BRDTQ58F21 947 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 PNMA8AQ86V59 439 aaPredicted RBP16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 C11orf70Q9BRQ4 267 aa16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 NOD2Q9HC29 1040 aa16.77■□□□□ 0.27
TSPAN4-211ENST00000468468 DOCK1Q14185 1865 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 CFAP73A6NFT4 308 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 TCEA3O75764 348 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 CYP1A1P04798 512 aaPredicted RBP16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 CETPP11597 493 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 TNNI1P19237 187 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 SLC8A1P32418 973 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 GJC1P36383 396 aa16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 SSR1P43307 286 aaKnown RBP16.76■□□□□ 0.27
TSPAN4-211ENST00000468468 TAS2R40P59535 323 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms