RNA–Protein interactions for RNA: ENST00000468347.1

SHQ1-204, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 134 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-204ENST00000468347 CHSY1Q86X52 802 aa2.02□□□□□ -2.09
SHQ1-204ENST00000468347 ZNF654Q8IZM8 581 aa2.02□□□□□ -2.09
SHQ1-204ENST00000468347 SEC16BQ96JE7 1060 aa2.02□□□□□ -2.09
SHQ1-204ENST00000468347 PBKQ96KB5 322 aa2.02□□□□□ -2.09
SHQ1-204ENST00000468347 MED15Q96RN5 788 aa2.02□□□□□ -2.09
SHQ1-204ENST00000468347 KLC4Q9NSK0 619 aa2.02□□□□□ -2.09
SHQ1-204ENST00000468347 PCDHB6Q9Y5E3 794 aa2.02□□□□□ -2.09
SHQ1-204ENST00000468347 IQCA1LA6NCM1 817 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 ZNF213O14771 459 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 PCDH8O95206 1070 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 IL1R2P27930 398 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 EPHA7Q15375 998 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 ANKS3Q6ZW76 656 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 OTOP1Q7RTM1 612 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 PNLDC1Q8NA58 520 aaKnown RBP2.01□□□□□ -2.09
SHQ1-204ENST00000468347 SSH1Q8WYL5 1049 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 MARS2Q96GW9 593 aaKnown RBP2.01□□□□□ -2.09
SHQ1-204ENST00000468347 ASB2Q96Q27 587 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 MYL10Q9BUA6 226 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 C1QTNF5Q9BXJ0 243 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 SIK3Q9Y2K2 1263 aa2.01□□□□□ -2.09
SHQ1-204ENST00000468347 IGKV6D-41A0A0C4DH26 115 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 A0A1W2PS29 197 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 DVL2O14641 736 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 GASTP01350 101 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 LTA4HP09960 611 aaKnown RBP2□□□□□ -2.09
SHQ1-204ENST00000468347 C6orf222P0C671 652 aaPredicted RBP2□□□□□ -2.09
SHQ1-204ENST00000468347 GAS1P54826 345 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 TNNI3KQ59H18 835 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 TIGD7Q6NT04 549 aaPredicted RBP2□□□□□ -2.09
SHQ1-204ENST00000468347 C2orf69Q8N8R5 385 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 CDYL2Q8N8U2 506 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 TMEM125Q96AQ2 219 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 FAM118BQ9BPY3 351 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 METTL5Q9NRN9 209 aaKnown RBP2□□□□□ -2.09
SHQ1-204ENST00000468347 GPRC5DQ9NZD1 345 aa2□□□□□ -2.09
SHQ1-204ENST00000468347 MYPNQ86TC9 1320 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 CYP17A1P05093 508 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 NR2F6P10588 404 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 SLC6A2P23975 617 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 HOXD9P28356 352 aaPredicted RBP1.99□□□□□ -2.09
SHQ1-204ENST00000468347 CFHR1Q03591 330 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 MGAT5Q09328 741 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 NFATC4Q14934 902 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 C19orf54Q5BKX5 351 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 RRP12Q5JTH9 1297 aaKnown RBP1.99□□□□□ -2.09
SHQ1-204ENST00000468347 CEP85LQ5SZL2 805 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 COLCA1Q6ZS62 124 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 SLC29A4Q7RTT9 530 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 PHYKPLQ8IUZ5 450 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 C7orf31Q8N865 590 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 FANCBQ8NB91 859 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 ZNF548Q8NEK5 533 aaPredicted RBP1.99□□□□□ -2.09
SHQ1-204ENST00000468347 TBC1D5Q92609 795 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 RFKQ969G6 155 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 PNKPQ96T60 521 aa1.99□□□□□ -2.09
SHQ1-204ENST00000468347 KLF2Q9Y5W3 355 aaPredicted RBP1.99□□□□□ -2.09
SHQ1-204ENST00000468347 ADGRA2Q96PE1 1338 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 PRAMEF4O60810 478 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 KRT37O76014 449 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 RRP1P56182 461 aaKnown RBP1.98□□□□□ -2.09
SHQ1-204ENST00000468347 NXPH1P58417 271 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 LMBR1LQ6UX01 489 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 MCF2L2Q86YR7 1114 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 CUL5Q93034 780 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 ORAI2Q96SN7 254 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 POFUT1Q9H488 388 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 MRPL44Q9H9J2 332 aaKnown RBP1.98□□□□□ -2.09
SHQ1-204ENST00000468347 PLSCR4Q9NRQ2 329 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 SERTAD4Q9NUC0 356 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 FAM30AQ9NZY2 134 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 ADAMTS5Q9UNA0 930 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 SCAF8Q9UPN6 1271 aaKnown RBP1.98□□□□□ -2.09
SHQ1-204ENST00000468347 SMAD5-AS1Q9Y6J3 95 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 SNED1Q8TER0 1413 aa1.98□□□□□ -2.09
SHQ1-204ENST00000468347 DOCK7Q96N67 2140 aa1.97□□□□□ -2.09
SHQ1-204ENST00000468347 NRP2O60462 931 aa1.97□□□□□ -2.09
SHQ1-204ENST00000468347 POMCP01189 267 aa1.97□□□□□ -2.09
SHQ1-204ENST00000468347 GSPT1P15170 499 aaKnown RBP1.97□□□□□ -2.09
SHQ1-204ENST00000468347 XPAP23025 273 aaPredicted RBP1.97□□□□□ -2.09
SHQ1-204ENST00000468347 PTX3P26022 381 aaPredicted RBP1.97□□□□□ -2.09
SHQ1-204ENST00000468347 VEGFCP49767 419 aa1.97□□□□□ -2.09
SHQ1-204ENST00000468347 HNRNPMP52272 730 aaKnown RBP eCLIP1.97□□□□□ -2.09
SHQ1-204ENST00000468347 UBXN2BQ14CS0 331 aa1.97□□□□□ -2.09
SHQ1-204ENST00000468347 KRTAP5-7Q6L8G8 165 aa1.97□□□□□ -2.09
SHQ1-204ENST00000468347 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP1.97□□□□□ -2.09
SHQ1-204ENST00000468347 ESPNLQ6ZVH7 1005 aa1.97□□□□□ -2.09
SHQ1-204ENST00000468347 NOC2LQ9Y3T9 749 aaKnown RBP1.97□□□□□ -2.09
SHQ1-204ENST00000468347 WDR81Q562E7 1941 aa1.97□□□□□ -2.09
SHQ1-204ENST00000468347 IGKV3D-20A0A0C4DH25 116 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 PRAMEF33A0A0G2JMD5 474 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 DIAPH1O60610 1272 aaKnown RBP1.96□□□□□ -2.1
SHQ1-204ENST00000468347 PRAMEF10O60809 474 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 TULP3O75386 442 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 PPP3CBP16298 524 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 CRHR1P34998 444 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 ME1P48163 572 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 GABREP78334 506 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 ITIH3Q06033 890 aa1.96□□□□□ -2.1
SHQ1-204ENST00000468347 PLAC9Q5JTB6 97 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms