RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 HACE1Q8IYU2 909 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 UBR7Q8N806 425 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 PCSK9Q8NBP7 692 aaKnown RBP10.9□□□□□ -0.66
MSH5-213ENST00000468136 RBBP8NLQ8NC74 664 aaPredicted RBP10.9□□□□□ -0.66
MSH5-213ENST00000468136 KAT5Q92993 513 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 HES6Q96HZ4 224 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 SEZ6LQ9BYH1 1024 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 MTMR12Q9C0I1 747 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 MIS12Q9H081 205 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 CARD9Q9H257 536 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 CREBZFQ9NS37 354 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 PUF60Q9UHX1 559 aaKnown RBP10.9□□□□□ -0.66
MSH5-213ENST00000468136 TFR2Q9UP52 801 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 SCINQ9Y6U3 715 aa10.9□□□□□ -0.66
MSH5-213ENST00000468136 PTPRJQ12913 1337 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 UTRNP46939 3433 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 LACTBL1A8MY62 500 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 CCDC188H7C350 402 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 B4GALT5O43286 388 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 ADCY6O43306 1168 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 RRP9O43818 475 aaKnown RBP10.89□□□□□ -0.67
MSH5-213ENST00000468136 CD4P01730 458 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 CALB1P05937 261 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 UNGP13051 313 aaPredicted RBP10.89□□□□□ -0.67
MSH5-213ENST00000468136 GNA15P30679 374 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 MAP2K2P36507 400 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 TNNC1P63316 161 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 MYO1EQ12965 1108 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 CCL14Q16627 93 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 DEFB115Q30KQ5 88 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 PRAMEF19Q5SWL8 479 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 TMEM270Q6UE05 265 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 NT5DC3Q86UY8 548 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 PHF13Q86YI8 300 aaPredicted RBP10.89□□□□□ -0.67
MSH5-213ENST00000468136 TMEM35BQ8NCS4 154 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 SLC20A1Q8WUM9 679 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.89□□□□□ -0.67
MSH5-213ENST00000468136 FAM212AQ96EL1 285 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 PI4K2AQ9BTU6 479 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 BCO2Q9BYV7 579 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 THAP2Q9H0W7 228 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 WNT8AQ9H1J5 351 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 APOBEC3GQ9HC16 384 aaKnown RBP10.89□□□□□ -0.67
MSH5-213ENST00000468136 ARFGAP3Q9NP61 516 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 CHST12Q9NRB3 414 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 CTTNBP2NLQ9P2B4 639 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 HDAC6Q9UBN7 1215 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 PCDHGC3Q9UN70 934 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 STXBP5LQ9Y2K9 1186 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 NUB1Q9Y5A7 615 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 EVPLQ92817 2033 aa10.89□□□□□ -0.67
MSH5-213ENST00000468136 CASP8AP2Q9UKL3 1982 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 CCDC66A2RUB6 948 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 TTLL13PA6NNM8 815 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 CAND2O75155 1236 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 CLSTN1O94985 981 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 GJB1P08034 283 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 MMEP08473 750 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 C6orf222P0C671 652 aaPredicted RBP10.88□□□□□ -0.67
MSH5-213ENST00000468136 IQCF3P0C7M6 154 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 CXCL8P10145 99 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 CYP3A5P20815 502 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 ABCB4P21439 1286 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 PAX3P23760 479 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 POLR2BP30876 1174 aaKnown RBP10.88□□□□□ -0.67
MSH5-213ENST00000468136 CDH5P33151 784 aaPredicted RBP10.88□□□□□ -0.67
MSH5-213ENST00000468136 PNPLA4P41247 253 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 FLT3LGP49771 235 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 SNX16P57768 344 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 MYL6P60660 151 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 SLC10A6Q3KNW5 377 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 GNASQ5JWF2 1037 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 LMBRD2Q68DH5 695 aaPredicted RBP10.88□□□□□ -0.67
MSH5-213ENST00000468136 PAXIP1Q6ZW49 1069 aaPredicted RBP10.88□□□□□ -0.67
MSH5-213ENST00000468136 EFCAB13Q8IY85 973 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 RASGEF1CQ8N431 466 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 LRRC52Q8N7C0 313 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 EIF1ADQ8N9N8 165 aaKnown RBP10.88□□□□□ -0.67
MSH5-213ENST00000468136 SPATA4Q8NEY3 305 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 BEST2Q8NFU1 509 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 PXYLP1Q8TE99 480 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 ZNF653Q96CK0 615 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 PKNOX2Q96KN3 472 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 RUNDC3BQ96NL0 473 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 PCDHB18PQ96TA0 734 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 TRIM6Q9C030 488 aaPredicted RBP10.88□□□□□ -0.67
MSH5-213ENST00000468136 XYLT2Q9H1B5 865 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 LHX5Q9H2C1 402 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 CISHQ9NSE2 258 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 GTF2IRD1Q9UHL9 959 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 STRIP2Q9ULQ0 834 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 UBQLN1Q9UMX0 589 aaKnown RBP10.88□□□□□ -0.67
MSH5-213ENST00000468136 MYH10P35580 1976 aa10.88□□□□□ -0.67
MSH5-213ENST00000468136 DOCK3Q8IZD9 2030 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 GOLGA6L10A0A0M3HER8 536 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 TMCO5BA8MYB1 307 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 PGRMC1O00264 195 aaKnown RBP10.87□□□□□ -0.67
MSH5-213ENST00000468136 KCNK3O14649 394 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 THAP12O43422 761 aa10.87□□□□□ -0.67
MSH5-213ENST00000468136 BUB1BO60566 1050 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms