RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 TBC1D13Q9NVG8 400 aa12.76□□□□□ -0.37
RNF13-208ENST00000467996 CXXC1Q9P0U4 656 aaPredicted RBP12.76□□□□□ -0.37
RNF13-208ENST00000467996 CACNG4Q9UBN1 327 aa12.76□□□□□ -0.37
RNF13-208ENST00000467996 AGAP1Q9UPQ3 857 aa12.76□□□□□ -0.37
RNF13-208ENST00000467996 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.76□□□□□ -0.37
RNF13-208ENST00000467996 ANO9A1A5B4 782 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 CASTOR2A6NHX0 329 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 B4GALT3O60512 393 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 ZC3H11AO75152 810 aaKnown RBP eCLIP12.75□□□□□ -0.37
RNF13-208ENST00000467996 NOL4O94818 638 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 DDHD2O94830 711 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 ASS1P00966 412 aaKnown RBP12.75□□□□□ -0.37
RNF13-208ENST00000467996 TRIM21P19474 475 aaKnown RBP12.75□□□□□ -0.37
RNF13-208ENST00000467996 NOP14P78316 857 aaKnown RBP12.75□□□□□ -0.37
RNF13-208ENST00000467996 RBP5P82980 135 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 DSC1Q08554 894 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 LRMPQ12912 555 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 ZNF699Q32M78 642 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 PAN2Q504Q3 1202 aaKnown RBP12.75□□□□□ -0.37
RNF13-208ENST00000467996 KLHDC7AQ5VTJ3 777 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 SPOPLQ6IQ16 392 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 FAM117BQ6P1L5 589 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 GJB7Q6PEY0 223 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 ZNF280BQ86YH2 543 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 ARHGEF19Q8IW93 802 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 DRC7Q8IY82 874 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 LRRC43Q8N309 656 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 LRRC52Q8N7C0 313 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 SPC24Q8NBT2 197 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 ZNF689Q96CS4 500 aaPredicted RBP12.75□□□□□ -0.37
RNF13-208ENST00000467996 IMPG2Q9BZV3 1241 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 TTYH3Q9C0H2 523 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 XYLT2Q9H1B5 865 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 APOBEC3GQ9HC16 384 aaKnown RBP12.75□□□□□ -0.37
RNF13-208ENST00000467996 KANSL3Q9P2N6 904 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 APEX2Q9UBZ4 518 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 AJAP1Q9UKB5 411 aaPredicted RBP12.75□□□□□ -0.37
RNF13-208ENST00000467996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.75□□□□□ -0.37
RNF13-208ENST00000467996 FHOD1Q9Y613 1164 aa12.75□□□□□ -0.37
RNF13-208ENST00000467996 PODXLO00592 558 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 PIRO00625 290 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 CLSTN1O94985 981 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 STAU1O95793 577 aaKnown RBP12.74□□□□□ -0.37
RNF13-208ENST00000467996 GYPCP04921 128 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 ATICP31939 592 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 CLCNKBP51801 687 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 RNASELQ05823 741 aaKnown RBP12.74□□□□□ -0.37
RNF13-208ENST00000467996 TBX2Q13207 712 aaPredicted RBP12.74□□□□□ -0.37
RNF13-208ENST00000467996 TRIM14Q14142 442 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 SGSM1Q2NKQ1 1148 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 FIGNQ5HY92 759 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 WDR44Q5JSH3 913 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 PHLDB3Q6NSJ2 640 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 COLGALT2Q8IYK4 626 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 CCDC150Q8NCX0 1101 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 TAF4BQ92750 862 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 HPDLQ96IR7 371 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 PDLIM2Q96JY6 352 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 ZNF560Q96MR9 790 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 UROC1Q96N76 676 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 NT5C1BQ96P26 610 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 SLC9A7Q96T83 725 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 PAAF1Q9BRP4 392 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 NUP58Q9BVL2 599 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 MTIF3Q9H2K0 278 aaKnown RBP12.74□□□□□ -0.37
RNF13-208ENST00000467996 VRTNQ9H8Y1 702 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 HCSTQ9UBK5 93 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 R3HCC1Q9Y3T6 440 aaKnown RBP12.74□□□□□ -0.37
RNF13-208ENST00000467996 NUB1Q9Y5A7 615 aa12.74□□□□□ -0.37
RNF13-208ENST00000467996 UCHL3P15374 230 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 RFX1P22670 979 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 RPL9P32969 192 aaKnown RBP12.73□□□□□ -0.37
RNF13-208ENST00000467996 PNPLA4P41247 253 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 TAF6P49848 677 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 POLR2FP61218 127 aaKnown RBP12.73□□□□□ -0.37
RNF13-208ENST00000467996 UPP1Q16831 310 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 RASIP1Q5U651 963 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 IQCEQ6IPM2 695 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 CMTR2Q8IYT2 770 aaKnown RBP12.73□□□□□ -0.37
RNF13-208ENST00000467996 PPM1KQ8N3J5 372 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 C3orf58Q8NDZ4 430 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 RABGGTAQ92696 567 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 TATDN2Q93075 761 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 IQCDQ96DY2 449 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 DDX27Q96GQ7 796 aaKnown RBP12.73□□□□□ -0.37
RNF13-208ENST00000467996 FAM193BQ96PV7 902 aaPredicted RBP12.73□□□□□ -0.37
RNF13-208ENST00000467996 NAA15Q9BXJ9 866 aaKnown RBP12.73□□□□□ -0.37
RNF13-208ENST00000467996 NIF3L1Q9GZT8 377 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 NRDE2Q9H7Z3 1164 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 CEP72Q9P209 647 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 IMPACTQ9P2X3 320 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 DNAJB4Q9UDY4 337 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 FBXL5Q9UKA1 691 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 POLIQ9UNA4 740 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 DAAM1Q9Y4D1 1078 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 SLC4A7Q9Y6M7 1214 aa12.73□□□□□ -0.37
RNF13-208ENST00000467996 VWA8A3KMH1 1905 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 A0A1W2PQJ5 194 aa12.72□□□□□ -0.37
RNF13-208ENST00000467996 RNF225M0QZC1 329 aaPredicted RBP12.72□□□□□ -0.37
RNF13-208ENST00000467996 SPTLC1O15269 473 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms