RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	UROD	P06132	367 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	CLCN4	P51793	760 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	MARS	P56192	900 aa	Known RBP	13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	UBASH3A	P57075	661 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	FANCC	Q00597	558 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	PLCB2	Q00722	1185 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	TUSC3	Q13454	348 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	DCAF4L1	Q3SXM0	396 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	ATF7IP2	Q5U623	682 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	KIAA0319	Q5VV43	1072 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	CES5A	Q6NT32	575 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	GPR65	Q8IYL9	337 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	SYCP3	Q8IZU3	236 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	TMEM161B	Q8NDZ6	487 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	HPS3	Q969F9	1004 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	RPGRIP1	Q96KN7	1286 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	NECTIN4	Q96NY8	510 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	RPS6KC1	Q96S38	1066 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	DUSP9	Q99956	384 aa	Known RBP	13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	SRRT	Q9BXP5	876 aa	Known RBP	13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	HSD3B7	Q9H2F3	369 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	RXFP1	Q9HBX9	757 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	METTL14	Q9HCE5	456 aa	Known RBP	13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	CHST7	Q9NS84	486 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	ARHGAP28	Q9P2N2	729 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	LIMA1	Q9UHB6	759 aa	Known RBP	13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	MUTYH	Q9UIF7	546 aa		13.09	□□□□□ -0.31
CTNS-205	ENST00000467663	MAPK13	O15264	365 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	SLC16A3	O15427	465 aa	Known RBP	13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	RECQL4	O94761	1208 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	PRPF6	O94906	941 aa	Known RBP	13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	ADCY5	O95622	1261 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	MYB	P10242	640 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	KLRC2	P26717	231 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	NMT1	P30419	496 aa	Known RBP	13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	GLUD2	P49448	558 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	DSG1	Q02413	1049 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	ENPEP	Q07075	957 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	STRN3	Q13033	797 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	NAB2	Q15742	525 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	TCP11X2	Q5H9J9	407 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	FUT10	Q6P4F1	479 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	TAS1R3	Q7RTX0	852 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	MAP4K3	Q8IVH8	894 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	FBXL18	Q96ME1	805 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	GPR62	Q9BZJ7	368 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	CXCL16	Q9H2A7	254 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	PTPRH	Q9HD43	1115 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	SAMSN1	Q9NSI8	373 aa	Known RBP	13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	RAPGEFL1	Q9UHV5	662 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	ADAM28	Q9UKQ2	775 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	TBX20	Q9UMR3	447 aa		13.08	□□□□□ -0.32
CTNS-205	ENST00000467663	TRIM49B	A6NDI0	452 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	KCNJ18	B7U540	433 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	C2CD2L	O14523	706 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	SLC16A4	O15374	487 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	TEX28	O15482	410 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	C1R	P00736	705 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	PIGR	P01833	764 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	TH	P07101	528 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	DEK	P35659	375 aa	Known RBP	13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	MTHFR	P42898	656 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	ZNF75D	P51815	510 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	CASP5	P51878	434 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	PMS1	P54277	932 aa	Known RBP	13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	ADAM9	Q13443	819 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	KCNJ12	Q14500	433 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	RARS2	Q5T160	578 aa	Known RBP	13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	SLFN12L	Q6IEE8	588 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	KIAA1841	Q6NSI8	718 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	FRMD5	Q7Z6J6	570 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	NELFCD	Q8IXH7	590 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	C12orf76	Q8N812	135 aa	Predicted RBP	13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	EDA	Q92838	391 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	RIPOR3	Q96MK2	946 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	ACO2	Q99798	780 aa	Known RBP	13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	PAAF1	Q9BRP4	392 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	MRPL4	Q9BYD3	311 aa	Known RBP	13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	POMK	Q9H5K3	350 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663	CDH22	Q9UJ99	828 aa		13.07	□□□□□ -0.32
CTNS-205	ENST00000467663		A0A1B0GTH6	734 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	TADA2A	O75478	443 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	NR3C1	P04150	777 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	ADH1A	P07327	375 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	GART	P22102	1010 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	PROZ	P22891	400 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	NR2F2	P24468	414 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	USP41	Q3LFD5	358 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	XKR4	Q5GH76	650 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	ATAT1	Q5SQI0	421 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	ZPBP2	Q6X784	338 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	GLIS3	Q8NEA6	775 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	RABGGTA	Q92696	567 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	IQCD	Q96DY2	449 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	FGFBP2	Q9BYJ0	223 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	CDT1	Q9H211	546 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	SFXN1	Q9H9B4	322 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	KIAA1586	Q9HCI6	787 aa		13.06	□□□□□ -0.32
CTNS-205	ENST00000467663	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms