RNA–Protein interactions for RNA: ENST00000466032.1

CHMP3-206, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 436 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-206ENST00000466032 TWF2Q6IBS0 349 aaKnown RBP6.49□□□□□ -1.37
CHMP3-206ENST00000466032 LRRC8DQ7L1W4 858 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 CACNA2D4Q7Z3S7 1137 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 TMC6Q7Z403 805 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 FAM228AQ86W67 206 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 HOMEZQ8IX15 550 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 RPUSD2Q8IZ73 545 aaKnown RBP6.49□□□□□ -1.37
CHMP3-206ENST00000466032 RDH13Q8NBN7 331 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 EHBP1Q8NDI1 1231 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 OR8K1Q8NGG5 319 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 SEPT8Q92599 483 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 DHX38Q92620 1227 aaKnown RBP6.49□□□□□ -1.37
CHMP3-206ENST00000466032 PCMTD1Q96MG8 357 aaPredicted RBP6.49□□□□□ -1.37
CHMP3-206ENST00000466032 PANX2Q96RD6 677 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 HTATIP2Q9BUP3 242 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 ELAC1Q9H777 363 aaKnown RBP6.49□□□□□ -1.37
CHMP3-206ENST00000466032 MINDY3Q9H8M7 445 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 TRMT13Q9NUP7 481 aaKnown RBP6.49□□□□□ -1.37
CHMP3-206ENST00000466032 TMEM51Q9NW97 253 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 TAB2Q9NYJ8 693 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 CEP72Q9P209 647 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 KANSL3Q9P2N6 904 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 ITGA11Q9UKX5 1188 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 CAPN11Q9UMQ6 739 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 ST3GAL5Q9UNP4 418 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 GIT1Q9Y2X7 761 aa6.49□□□□□ -1.37
CHMP3-206ENST00000466032 TTC26A0AVF1 554 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 KRBA1A5PL33 1030 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 CCP110O43303 1012 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 FAM189A1O60320 539 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 PHACTR2O75167 634 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 STAU1O95793 577 aaKnown RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 CXCL10P02778 98 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 CLTBP09497 229 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 IQCF3P0C7M6 154 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 DLATP10515 647 aaKnown RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 ITGA4P13612 1032 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 KCNE1P15382 129 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 KCNJ6P48051 423 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 ACOT2P49753 483 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 MFAP3P55082 362 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 BPIFB4P59827 614 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 CDK17Q00537 523 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 GCNT1Q02742 428 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 TMEM62Q0P6H9 643 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 MYO1EQ12965 1108 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 TBX2Q13207 712 aaPredicted RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 TRPC3Q13507 836 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 HIC1Q14526 733 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 SYCP1Q15431 976 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 SGSM1Q2NKQ1 1148 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 PUS10Q3MIT2 529 aaKnown RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 HSP90AA4PQ58FG1 418 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 XKR4Q5GH76 650 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 ZNF618Q5T7W0 954 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 PPP1R2P3Q6NXS1 205 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 CRELD2Q6UXH1 353 aaPredicted RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 SLC24A5Q71RS6 500 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 MRPL10Q7Z7H8 261 aaKnown RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 ZBTB33Q86T24 672 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 VPS36Q86VN1 386 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 CBWD2Q8IUF1 395 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 THNSL1Q8IYQ7 743 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 TMEM199Q8N511 208 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 BEST2Q8NFU1 509 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 SAAL1Q96ER3 474 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 ZBTB45Q96K62 511 aaPredicted RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 IFIH1Q9BYX4 1025 aaKnown RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 MCOLN1Q9GZU1 580 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 HIPK3Q9H422 1215 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 MMRN2Q9H8L6 949 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 VRTNQ9H8Y1 702 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 ERVK-5Q9HDB9 667 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 LUC7LQ9NQ29 371 aaKnown RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 RGS18Q9NS28 235 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 FAM105AQ9NUU6 356 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 INTS13Q9NVM9 706 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 RAB20Q9NX57 234 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 GCNT4Q9P109 453 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 CNTN3Q9P232 1028 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 APEX2Q9UBZ4 518 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 PRKAG2Q9UGJ0 569 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 PADI3Q9ULW8 664 aa6.48□□□□□ -1.37
CHMP3-206ENST00000466032 UBQLN1Q9UMX0 589 aaKnown RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 NOC2LQ9Y3T9 749 aaKnown RBP6.48□□□□□ -1.37
CHMP3-206ENST00000466032 GOLGA8IPA6NC78 632 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 GOLGA8JA6NMD2 632 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 LRRIQ3A6PVS8 624 aaPredicted RBP6.47□□□□□ -1.37
CHMP3-206ENST00000466032 CLGNO14967 610 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 KIAA0355O15063 1070 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 INPPL1O15357 1258 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 ARHGAP6O43182 974 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 TEX33O43247 280 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 B4GALT5O43286 388 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 AP5Z1O43299 807 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 MAN1A2O60476 641 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 PQBP1O60828 265 aaKnown RBP6.47□□□□□ -1.37
CHMP3-206ENST00000466032 GFPT2O94808 682 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 KIF4AO95239 1232 aa6.47□□□□□ -1.37
CHMP3-206ENST00000466032 IPO7O95373 1038 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms