RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 RRAGAQ7L523 313 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 PPFIBP1Q86W92 1011 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 KAT5Q92993 513 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 UBE2OQ9C0C9 1292 aaKnown RBP18.54■□□□□ 0.56
PTPRU-206ENST00000465525 ITGA11Q9UKX5 1188 aa18.54■□□□□ 0.56
PTPRU-206ENST00000465525 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.54■□□□□ 0.56
PTPRU-206ENST00000465525 CASTOR2A6NHX0 329 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 HOXA2O43364 376 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 ADKP55263 362 aaKnown RBP18.53■□□□□ 0.56
PTPRU-206ENST00000465525 NOMO2Q5JPE7 1267 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 RASIP1Q5U651 963 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 IQCEQ6IPM2 695 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 ABI1Q8IZP0 508 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 PHOSPHO2Q8TCD6 241 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 PPP1R9BQ96SB3 815 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 APOBEC3GQ9HC16 384 aaKnown RBP18.53■□□□□ 0.56
PTPRU-206ENST00000465525 PLCB1Q9NQ66 1216 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 CXXC1Q9P0U4 656 aaPredicted RBP18.53■□□□□ 0.56
PTPRU-206ENST00000465525 HCSTQ9UBK5 93 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 SLC4A7Q9Y6M7 1214 aa18.53■□□□□ 0.56
PTPRU-206ENST00000465525 CEP290O15078 2479 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 B4GALT3O60512 393 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 UCHL3P15374 230 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 IGFBP6P24592 240 aaPredicted RBP18.52■□□□□ 0.56
PTPRU-206ENST00000465525 PAN2Q504Q3 1202 aaKnown RBP18.52■□□□□ 0.56
PTPRU-206ENST00000465525 WDR44Q5JSH3 913 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 C9orf57Q5W0N0 161 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 URGCPQ8TCY9 931 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 NT5C1BQ96P26 610 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 PAAF1Q9BRP4 392 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 TTYH3Q9C0H2 523 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 UBE2TQ9NPD8 197 aaPredicted RBP18.52■□□□□ 0.56
PTPRU-206ENST00000465525 APEX2Q9UBZ4 518 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 NUB1Q9Y5A7 615 aa18.52■□□□□ 0.56
PTPRU-206ENST00000465525 TBKBP1A7MCY6 615 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 XPOTO43592 962 aaKnown RBP18.51■□□□□ 0.55
PTPRU-206ENST00000465525 PTMAP06454 111 aaKnown RBP18.51■□□□□ 0.55
PTPRU-206ENST00000465525 BMP8BP34820 402 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 NOP14P78316 857 aaKnown RBP18.51■□□□□ 0.55
PTPRU-206ENST00000465525 RBP5P82980 135 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 GRIK3Q13003 919 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 RAPGEF1Q13905 1077 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 SHHQ15465 462 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 ZNF699Q32M78 642 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 C9orf50Q5SZB4 431 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 CCDC186Q7Z3E2 898 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 CACNA2D4Q7Z3S7 1137 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 ZNF280BQ86YH2 543 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 PPM1KQ8N3J5 372 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 RSPH1Q8WYR4 309 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 HPDLQ96IR7 371 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 CASD1Q96PB1 797 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 SLC9A7Q96T83 725 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 ARID3AQ99856 593 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 XYLT2Q9H1B5 865 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 SLC38A7Q9NVC3 462 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 TBC1D13Q9NVG8 400 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 DNAJC12Q9UKB3 198 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 POLIQ9UNA4 740 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 R3HCC1Q9Y3T6 440 aaKnown RBP18.51■□□□□ 0.55
PTPRU-206ENST00000465525 COL4A6Q14031 1691 aa18.51■□□□□ 0.55
PTPRU-206ENST00000465525 DDHD2O94830 711 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 ASS1P00966 412 aaKnown RBP18.5■□□□□ 0.55
PTPRU-206ENST00000465525 PNMA6AP0CW24 399 aaPredicted RBP18.5■□□□□ 0.55
PTPRU-206ENST00000465525 RNASELQ05823 741 aaKnown RBP18.5■□□□□ 0.55
PTPRU-206ENST00000465525 ARHGAP44Q17R89 818 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 SCARA5Q6ZMJ2 495 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 TSPAN18Q96SJ8 248 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 NUP58Q9BVL2 599 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 IMPG2Q9BZV3 1241 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 CEP72Q9P209 647 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 NXF1Q9UBU9 619 aaKnown RBP18.5■□□□□ 0.55
PTPRU-206ENST00000465525 INPPL1O15357 1258 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 DGKIO75912 1065 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 CYP3A5P20815 502 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 CLCNKBP51801 687 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 TRIM14Q14142 442 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 SGSM1Q2NKQ1 1148 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 CCDC150Q8NCX0 1101 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 RNPC3Q96LT9 517 aaKnown RBP18.5■□□□□ 0.55
PTPRU-206ENST00000465525 KREMEN1Q96MU8 473 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 KANSL3Q9P2N6 904 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 IMPACTQ9P2X3 320 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 CAPN11Q9UMQ6 739 aa18.5■□□□□ 0.55
PTPRU-206ENST00000465525 ANO9A1A5B4 782 aa18.49■□□□□ 0.55
PTPRU-206ENST00000465525 AKR1B15C9JRZ8 316 aaPredicted RBP18.49■□□□□ 0.55
PTPRU-206ENST00000465525 TPM1P09493 284 aa18.49■□□□□ 0.55
PTPRU-206ENST00000465525 ATP2A2P16615 1042 aaKnown RBP18.49■□□□□ 0.55
PTPRU-206ENST00000465525 WDR72Q3MJ13 1102 aa18.49■□□□□ 0.55
PTPRU-206ENST00000465525 FIGNQ5HY92 759 aa18.49■□□□□ 0.55
PTPRU-206ENST00000465525 BAP1Q92560 729 aa18.49■□□□□ 0.55
PTPRU-206ENST00000465525 NAA15Q9BXJ9 866 aaKnown RBP18.49■□□□□ 0.55
PTPRU-206ENST00000465525 DNAJB4Q9UDY4 337 aa18.49■□□□□ 0.55
PTPRU-206ENST00000465525 LUC7L2Q9Y383 392 aaKnown RBP18.49■□□□□ 0.55
PTPRU-206ENST00000465525 LRRC53A6NM62 1247 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 GOLGA6L6A8MZA4 724 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 F8W810 466 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 PODXLO00592 558 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 PIRO00625 290 aa18.48■□□□□ 0.55
PTPRU-206ENST00000465525 SPTLC1O15269 473 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms