RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 UBXN2BQ14CS0 331 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 MAPRE1Q15691 268 aaKnown RBP3.94□□□□□ -1.78
SNX4-202ENST00000465505 ERCC6LQ2NKX8 1250 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 MUM1Q2TAK8 710 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 PLEKHG6Q3KR16 790 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 SPDYE7PQ495Y7 208 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 HSP90B2PQ58FF3 399 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 RRP12Q5JTH9 1297 aaKnown RBP3.94□□□□□ -1.78
SNX4-202ENST00000465505 ZNF362Q5T0B9 420 aaPredicted RBP3.94□□□□□ -1.78
SNX4-202ENST00000465505 LRCH2Q5VUJ6 765 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 AFMIDQ63HM1 303 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 KCNK18Q7Z418 384 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 STRA8Q7Z7C7 330 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 ANKRD13BQ86YJ7 626 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 SMAP1Q8IYB5 467 aaPredicted RBP3.94□□□□□ -1.78
SNX4-202ENST00000465505 STON2Q8WXE9 905 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 FATE1Q969F0 183 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 BOD1Q96IK1 185 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 Q96MF0 132 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 PAGR1Q9BTK6 254 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 MRI1Q9BV20 369 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 PCGF6Q9BYE7 350 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 ALOXE3Q9BYJ1 711 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 GREM2Q9H772 168 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 TMEM74BQ9NUR3 256 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 SPATA31A6Q5VVP1 1343 aa3.94□□□□□ -1.78
SNX4-202ENST00000465505 RAD54L2Q9Y4B4 1467 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 CCDC78A2IDD5 438 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 GOLGA8AA7E2F4 631 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 TIMM44O43615 452 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 FGAP02671 866 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 NEFHP12036 1026 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 FDXRP22570 491 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 GCSHP23434 173 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 ECHS1P30084 290 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 GUCY1A2P33402 732 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 RAP2BP61225 183 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 OCA2Q04671 838 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 POU5F1BQ06416 359 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 PPP3CAQ08209 521 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 STRN3Q13033 797 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 ZNF169Q14929 603 aaPredicted RBP3.93□□□□□ -1.78
SNX4-202ENST00000465505 CCDC174Q6PII3 467 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 KRT77Q7Z794 578 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 THNSL2Q86YJ6 484 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 DRC7Q8IY82 874 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 FAM43AQ8N2R8 423 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 SLC44A3Q8N4M1 653 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 CAGE1Q8TC20 777 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 TGFBRAP1Q8WUH2 860 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 AUTS2Q8WXX7 1259 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 HOXB13Q92826 284 aaPredicted RBP3.93□□□□□ -1.78
SNX4-202ENST00000465505 SLC39A13Q96H72 371 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 FUBP3Q96I24 572 aaKnown RBP eCLIP3.93□□□□□ -1.78
SNX4-202ENST00000465505 ZSWIM1Q9BR11 485 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 LRFN3Q9BTN0 628 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 RANBP17Q9H2T7 1088 aaKnown RBP3.93□□□□□ -1.78
SNX4-202ENST00000465505 RSAD1Q9HA92 442 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 VTA1Q9NP79 307 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 CASS4Q9NQ75 786 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 RBM12Q9NTZ6 932 aaKnown RBP3.93□□□□□ -1.78
SNX4-202ENST00000465505 ANAPC4Q9UJX5 808 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 ODF2LQ9ULJ1 636 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 NOX1Q9Y5S8 564 aa3.93□□□□□ -1.78
SNX4-202ENST00000465505 PRSS23O95084 383 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 POMCP01189 267 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 TGFB3P10600 412 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 IL2RBP14784 551 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 CD53P19397 219 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 RARRES1P49788 294 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 EIF5P55010 431 aaKnown RBP3.92□□□□□ -1.78
SNX4-202ENST00000465505 ELLP55199 621 aaPredicted RBP3.92□□□□□ -1.78
SNX4-202ENST00000465505 CXADRP78310 365 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 SIM1P81133 766 aaPredicted RBP3.92□□□□□ -1.78
SNX4-202ENST00000465505 ANO4Q32M45 955 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 MUM1L1Q5H9M0 696 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 C1QTNF12Q5T7M4 302 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 OTUD7BQ6GQQ9 843 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 FAM180AQ6UWF9 173 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 Q6ZNX1 250 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 CATIPQ7Z7H3 387 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 ZSCAN30Q86W11 494 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 PQLC1Q8N2U9 271 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 UBR7Q8N806 425 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 BOLLQ8N9W6 283 aaKnown RBP3.92□□□□□ -1.78
SNX4-202ENST00000465505 MIGA1Q8NAN2 632 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 NELL1Q92832 810 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 NACC2Q96BF6 587 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 TTC14Q96N46 770 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 MYCBPQ99417 103 aaPredicted RBP3.92□□□□□ -1.78
SNX4-202ENST00000465505 QRSL1Q9H0R6 528 aaKnown RBP3.92□□□□□ -1.78
SNX4-202ENST00000465505 PDCL3Q9H2J4 239 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 RNPEPQ9H4A4 650 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 SPC25Q9HBM1 224 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 MOCS1Q9NZB8 636 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 SLC23A1Q9UHI7 598 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 TLK1Q9UKI8 766 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 APOBEC2Q9Y235 224 aaKnown RBP3.92□□□□□ -1.78
SNX4-202ENST00000465505 SIK3Q9Y2K2 1263 aa3.92□□□□□ -1.78
SNX4-202ENST00000465505 KIF20AO95235 890 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms