RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 PDZD7Q9H5P4 517 aa16.53■□□□□ 0.24
HDAC6-214ENST00000465269 TRPV4Q9HBA0 871 aa16.53■□□□□ 0.24
HDAC6-214ENST00000465269 GPRC5CQ9NQ84 441 aa16.53■□□□□ 0.24
HDAC6-214ENST00000465269 INVSQ9Y283 1065 aa16.53■□□□□ 0.24
HDAC6-214ENST00000465269 PCDHGA5Q9Y5G8 931 aa16.53■□□□□ 0.24
HDAC6-214ENST00000465269 KALRNO60229 2985 aa16.53■□□□□ 0.24
HDAC6-214ENST00000465269 ZMYM2Q9UBW7 1377 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 NAV2Q8IVL1 2488 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 PATE3B3GLJ2 98 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 NTRK3Q16288 839 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 UAP1L1Q3KQV9 507 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 EEF1DP3Q658K8 133 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 SLC8B1Q6J4K2 584 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 ANKS3Q6ZW76 656 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 RTL10Q7L3V2 364 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 TPH2Q8IWU9 490 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 TCEAL8Q8IYN2 117 aa16.52■□□□□ 0.24
HDAC6-214ENST00000465269 POLR3FQ9H1D9 316 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-214ENST00000465269 C8orf33Q9H7E9 229 aaPredicted RBP16.52■□□□□ 0.24
HDAC6-214ENST00000465269 NCOA5Q9HCD5 579 aaKnown RBP16.52■□□□□ 0.24
HDAC6-214ENST00000465269 ADAMTS20P59510 1910 aa16.52■□□□□ 0.23
HDAC6-214ENST00000465269 ABCA7Q8IZY2 2146 aa16.52■□□□□ 0.23
HDAC6-214ENST00000465269 A0A1W2PRU2 124 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 LRRIQ4A6NIV6 560 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 CHADO15335 359 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 MICAL2O94851 1124 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 CAVIN2O95810 425 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 ATF2P15336 505 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 LIG1P18858 919 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 AKAP17AQ02040 695 aaKnown RBP16.51■□□□□ 0.23
HDAC6-214ENST00000465269 SOX4Q06945 474 aaPredicted RBP16.51■□□□□ 0.23
HDAC6-214ENST00000465269 DAB2IPQ5VWQ8 1189 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 OTUD6AQ7L8S5 288 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 HAS1Q92839 578 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 BRF1Q92994 677 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 ZC3H10Q96K80 434 aaKnown RBP16.51■□□□□ 0.23
HDAC6-214ENST00000465269 KCNMB3Q9NPA1 279 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 PPME1Q9Y570 386 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 TRIP11Q15643 1979 aa16.51■□□□□ 0.23
HDAC6-214ENST00000465269 TENM4Q6N022 2769 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 DKC1O60832 514 aaKnown RBP eCLIP16.5■□□□□ 0.23
HDAC6-214ENST00000465269 MLLT6P55198 1093 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-214ENST00000465269 FGD1P98174 961 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 FCHO2Q0JRZ9 810 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 EPHA7Q15375 998 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 NPY5RQ15761 445 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 UPP1Q16831 310 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 TMEM132AQ24JP5 1023 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 Q6ZUG5 572 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 RALGPS2Q86X27 583 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-214ENST00000465269 ARID3BQ8IVW6 561 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-214ENST00000465269 ZNF512Q96ME7 567 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-214ENST00000465269 AIFM3Q96NN9 605 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 BBC3Q96PG8 261 aaPredicted RBP16.5■□□□□ 0.23
HDAC6-214ENST00000465269 PPP1R10Q96QC0 940 aaKnown RBP16.5■□□□□ 0.23
HDAC6-214ENST00000465269 ASAH2Q9NR71 780 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 PCDHA4Q9UN74 947 aa16.5■□□□□ 0.23
HDAC6-214ENST00000465269 CCDC196A0A1B0GTZ2 297 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 SPAARA0A1B0GVQ0 90 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 BCLAF3A2AJT9 711 aaKnown RBP16.49■□□□□ 0.23
HDAC6-214ENST00000465269 TMEM189-UBE2V1I3L0A0 370 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 M0R2N6 131 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 CDX4O14627 284 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-214ENST00000465269 CCT2P78371 535 aaKnown RBP16.49■□□□□ 0.23
HDAC6-214ENST00000465269 POU5F1BQ06416 359 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 NAIF1Q69YI7 327 aaPredicted RBP16.49■□□□□ 0.23
HDAC6-214ENST00000465269 IQCEQ6IPM2 695 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 FSTL4Q6MZW2 842 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 ELMOD1Q8N336 334 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 TMEM130Q8N3G9 435 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 MSANTD3Q96H12 275 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 ZSWIM4Q9H7M6 989 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 FBXL5Q9UKA1 691 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 SLC8A2Q9UPR5 921 aa16.49■□□□□ 0.23
HDAC6-214ENST00000465269 APC2O95996 2303 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 USO1O60763 962 aaKnown RBP16.48■□□□□ 0.23
HDAC6-214ENST00000465269 SLITRK3O94933 977 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 CEACAM1P13688 526 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 U2AF2P26368 475 aaKnown RBP eCLIP16.48■□□□□ 0.23
HDAC6-214ENST00000465269 RCAN1P53805 252 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 EPHA5P54756 1037 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 CACNB1Q02641 598 aaPredicted RBP16.48■□□□□ 0.23
HDAC6-214ENST00000465269 BLIDQ8IZY5 108 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 PIGOQ8TEQ8 1089 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 KIF12Q96FN5 646 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 MKNK1Q9BUB5 465 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 NFKBIZQ9BYH8 718 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 SMG9Q9H0W8 520 aaKnown RBP16.48■□□□□ 0.23
HDAC6-214ENST00000465269 TMEM9BQ9NQ34 198 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 NUP205Q92621 2012 aa16.48■□□□□ 0.23
HDAC6-214ENST00000465269 GON4LQ3T8J9 2241 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 ASXL3Q9C0F0 2248 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 PCNX2A6NKB5 2137 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 DTNBO60941 627 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 PRAMEF12O95522 483 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 CSRP1P21291 193 aaKnown RBP16.47■□□□□ 0.23
HDAC6-214ENST00000465269 COL28A1Q2UY09 1125 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 MOXD1Q6UVY6 613 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 RNF19BQ6ZMZ0 732 aa16.47■□□□□ 0.23
HDAC6-214ENST00000465269 PDZD3Q86UT5 571 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms