RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 SMIM5Q71RC9 77 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 NLRP9Q7RTR0 991 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 KIAA0825Q8IV33 1275 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 DHX37Q8IY37 1157 aaKnown RBP7.74□□□□□ -1.17
USP48-206ENST00000464577 DAW1Q8N136 415 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 TTC8Q8TAM2 541 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 TEKT4Q8WW24 435 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 DDX1Q92499 740 aaKnown RBP7.74□□□□□ -1.17
USP48-206ENST00000464577 RPGRQ92834 1020 aaKnown RBP7.74□□□□□ -1.17
USP48-206ENST00000464577 IFT43Q96FT9 208 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 C9orf72Q96LT7 481 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SMC6Q96SB8 1091 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 RBM15Q96T37 977 aaKnown RBP eCLIP7.74□□□□□ -1.17
USP48-206ENST00000464577 PAIP2Q9BPZ3 127 aaKnown RBP7.74□□□□□ -1.17
USP48-206ENST00000464577 SYT15Q9BQS2 421 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 HERPUD2Q9BSE4 406 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 KIAA1586Q9HCI6 787 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.74□□□□□ -1.17
USP48-206ENST00000464577 SLC24A2Q9UI40 661 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 ZFP69BQ9UJL9 534 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 ANAPC7Q9UJX3 599 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 R3HDM2Q9Y2K5 976 aaKnown RBP7.74□□□□□ -1.17
USP48-206ENST00000464577 COQ4Q9Y3A0 265 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 GSTTP1A0A1W2PQM5 241 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SPDYE5A6NIY4 337 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 TYROBPO43914 113 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 GRIN3BO60391 1043 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 TOM1O60784 492 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 GAS7O60861 476 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 ZBED4O75132 1171 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SPAG7O75391 227 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 CBX6O95503 412 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SKIP12755 728 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 TUBP50607 506 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 TRAF1Q13077 416 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 CTC1Q2NKJ3 1217 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 CRY2Q49AN0 593 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 GRIPAP1Q4V328 841 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 TAF1BQ53T94 588 aaPredicted RBP7.74□□□□□ -1.17
USP48-206ENST00000464577 ZC3H12AQ5D1E8 599 aaKnown RBP7.74□□□□□ -1.17
USP48-206ENST00000464577 THEMIS2Q5TEJ8 643 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 TMEM154Q6P9G4 183 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 ZNF449Q6P9G9 518 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 B3GNT9Q6UX72 402 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 MAMSTRQ6ZN01 415 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 RDH13Q8NBN7 331 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SUPT20HQ8NEM7 779 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 PLEKHO2Q8TD55 490 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 HELQQ8TDG4 1101 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SPOCK2Q92563 424 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 PWWP2AQ96N64 755 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 ST6GALNAC4Q9H4F1 302 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SLCO1B3Q9NPD5 702 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 NMRK1Q9NWW6 199 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 HSPBP1Q9NZL4 362 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 FETUBQ9UGM5 382 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 GRID1Q9ULK0 1009 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 SIPA1L1O43166 1804 aa7.74□□□□□ -1.17
USP48-206ENST00000464577 NFASCO94856 1347 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 DNALI1O14645 258 aaPredicted RBP7.73□□□□□ -1.17
USP48-206ENST00000464577 ZBTB39O15060 712 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 CHMP2AO43633 222 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 CCDC22O60826 627 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 ENTPD5O75356 428 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 PROSCO94903 275 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 PDHA1P08559 390 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 TROVE2P10155 538 aaKnown RBP eCLIP7.73□□□□□ -1.17
USP48-206ENST00000464577 HOXA13P31271 388 aaPredicted RBP7.73□□□□□ -1.17
USP48-206ENST00000464577 GPC3P51654 580 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 NBPF20Q3BBV1 942 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 USH1GQ495M9 461 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 RBM26Q5T8P6 1007 aaKnown RBP7.73□□□□□ -1.17
USP48-206ENST00000464577 HHATQ5VTY9 493 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 OR52E8Q6IFG1 317 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 CDC42EP5Q6NZY7 148 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 DRICH1Q6PGQ1 229 aaPredicted RBP7.73□□□□□ -1.17
USP48-206ENST00000464577 MTHFD1LQ6UB35 978 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 ENOSF1Q7L5Y1 443 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 MAEAQ7L5Y9 396 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 OTOAQ7RTW8 1153 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 CLNKQ7Z7G1 428 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 PRUNE1Q86TP1 453 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 KATNAL2Q8IYT4 538 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 PPM1KQ8N3J5 372 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 ZNF75CPQ92670 426 aaPredicted RBP7.73□□□□□ -1.17
USP48-206ENST00000464577 ARHGEF1Q92888 912 aaKnown RBP7.73□□□□□ -1.17
USP48-206ENST00000464577 NT5C1BQ96P26 610 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 MIPEPQ99797 713 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 CBWD1Q9BRT8 395 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 MMADHCQ9H3L0 296 aaPredicted RBP7.73□□□□□ -1.17
USP48-206ENST00000464577 EHMT1Q9H9B1 1298 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 SAYSD1Q9NPB0 183 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 KCNQ5Q9NR82 932 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 LARSQ9P2J5 1176 aaKnown RBP7.73□□□□□ -1.17
USP48-206ENST00000464577 WDR35Q9P2L0 1181 aa7.73□□□□□ -1.17
USP48-206ENST00000464577 WRAP73Q9P2S5 460 aaPredicted RBP7.73□□□□□ -1.17
USP48-206ENST00000464577 ZNF335Q9H4Z2 1342 aaPredicted RBP7.73□□□□□ -1.17
USP48-206ENST00000464577 DNAJC6O75061 913 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 BBOX1O75936 387 aa7.72□□□□□ -1.17
USP48-206ENST00000464577 RALAP11233 206 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms