RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 PAN2Q504Q3 1202 aaKnown RBP13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 RABGGTAQ92696 567 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 TATDN2Q93075 761 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 NUP58Q9BVL2 599 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 XYLT2Q9H1B5 865 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 APEX2Q9UBZ4 518 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 CEP290O15078 2479 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 ANO9A1A5B4 782 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 PIRO00625 290 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 DDHD2O94830 711 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 GYPCP04921 128 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 UCHL3P15374 230 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 MAGEA10P43363 369 aaPredicted RBP13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 CLCNKBP51801 687 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 POLR2FP61218 127 aaKnown RBP13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 ZNF699Q32M78 642 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 RRAGAQ7L523 313 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 PPFIBP1Q86W92 1011 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 ARHGEF19Q8IW93 802 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 HPDLQ96IR7 371 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 PDLIM2Q96JY6 352 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 NT5C1BQ96P26 610 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 PAAF1Q9BRP4 392 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 GANQ9H2C0 597 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 APOBEC3GQ9HC16 384 aaKnown RBP13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 NLRC4Q9NPP4 1024 aa13.74□□□□□ -0.21
SUPT20H-204ENST00000464572 ZC3H11AO75152 810 aaKnown RBP eCLIP13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 LRPAP1P30533 357 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 PPM1KQ8N3J5 372 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 HERVK_113Q902F9 699 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 FAM193BQ96PV7 902 aaPredicted RBP13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 UBE2TQ9NPD8 197 aaPredicted RBP13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 NUB1Q9Y5A7 615 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 FHOD1Q9Y613 1164 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 RNF225M0QZC1 329 aaPredicted RBP13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 B4GALT3O60512 393 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 ATICP31939 592 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 CASP14P31944 242 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 WDR72Q3MJ13 1102 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 MRPL9Q9BYD2 267 aaKnown RBP13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 TTYH3Q9C0H2 523 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 HCSTQ9UBK5 93 aa13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 NXF1Q9UBU9 619 aaKnown RBP13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 LAMA2P24043 3122 aaKnown RBP13.73□□□□□ -0.21
SUPT20H-204ENST00000464572 SCN1AP35498 2009 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 DSC1Q08554 894 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 MYO1EQ12965 1108 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 FIGNQ5HY92 759 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 IQCEQ6IPM2 695 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 CACNA2D4Q7Z3S7 1137 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 LRRC52Q8N7C0 313 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 DNAJB4Q9UDY4 337 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 DNAJC12Q9UKB3 198 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 AJAP1Q9UKB5 411 aaPredicted RBP13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 SLC4A7Q9Y6M7 1214 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 FNDC1Q4ZHG4 1894 aaPredicted RBP13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 PODXLO00592 558 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 IGFBP6P24592 240 aaPredicted RBP13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 RPL9P32969 192 aaKnown RBP13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 FXR1P51114 621 aaKnown RBP eCLIP13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 GOLGA8FQ08AF8 430 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 GOLGA8DPQ0D2H9 430 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 RAPGEF1Q13905 1077 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 TRIM14Q14142 442 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 UPP1Q16831 310 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 ZNF667Q5HYK9 610 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 COLGALT2Q8IYK4 626 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 TAF4BQ92750 862 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 KAT5Q92993 513 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 NRDE2Q9H7Z3 1164 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 CEP72Q9P209 647 aa13.72□□□□□ -0.21
SUPT20H-204ENST00000464572 TPM1P09493 284 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 CCDC173Q0VFZ6 552 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 LRRC43Q8N309 656 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 RSPH1Q8WYR4 309 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 ZNF689Q96CS4 500 aaPredicted RBP13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 ZNF560Q96MR9 790 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 MTIF3Q9H2K0 278 aaKnown RBP13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 IMPACTQ9P2X3 320 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 CAPN11Q9UMQ6 739 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 LUC7L2Q9Y383 392 aaKnown RBP13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 B3GAT3O94766 335 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 OR1G1P47890 313 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 TAF6P49848 677 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 ADKP55263 362 aaKnown RBP13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 ARHGAP44Q17R89 818 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 C3orf58Q8NDZ4 430 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 IQCDQ96DY2 449 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 UROC1Q96N76 676 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 YME1L1Q96TA2 773 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 ARID3AQ99856 593 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 NAA15Q9BXJ9 866 aaKnown RBP13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 VRTNQ9H8Y1 702 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 FBXL5Q9UKA1 691 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 POLIQ9UNA4 740 aa13.71□□□□□ -0.21
SUPT20H-204ENST00000464572 GOLGA6L6A8MZA4 724 aa13.7□□□□□ -0.22
SUPT20H-204ENST00000464572 SPTLC1O15269 473 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms