RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 TSC2P49815 1807 aa11.21□□□□□ -0.62
TMEM54-203ENST00000463914 E9PMD0 336 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 MYL4P12829 197 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 KCNE1P15382 129 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 MUTP22033 750 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 TGM1P22735 817 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 PROZP22891 400 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 GDI1P31150 447 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 VIPR2P41587 438 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 ATXN1P54253 815 aaKnown RBP11.2□□□□□ -0.62
TMEM54-203ENST00000463914 DMP1Q13316 513 aaPredicted RBP11.2□□□□□ -0.62
TMEM54-203ENST00000463914 MRPL58Q14197 206 aaKnown RBP11.2□□□□□ -0.62
TMEM54-203ENST00000463914 ZNF280DQ6N043 979 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 MPZL3Q6UWV2 235 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 MAP4K3Q8IVH8 894 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 C4orf32Q8N8J7 132 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 FAM3CQ92520 227 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 SMARCD2Q92925 531 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 ZBTB45Q96K62 511 aaPredicted RBP11.2□□□□□ -0.62
TMEM54-203ENST00000463914 SUSD3Q96L08 255 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 CNTNAP3BQ96NU0 1288 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 ACAP3Q96P50 834 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 TRMT61BQ9BVS5 477 aaKnown RBP11.2□□□□□ -0.62
TMEM54-203ENST00000463914 CNTNAP3Q9BZ76 1288 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
TMEM54-203ENST00000463914 TMEM134Q9H6X4 195 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 KMT5AQ9NQR1 393 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 ANKFY1Q9P2R3 1169 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 LRWD1Q9UFC0 647 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 CDV3Q9UKY7 258 aaKnown RBP11.2□□□□□ -0.62
TMEM54-203ENST00000463914 YIPF1Q9Y548 306 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 PIAS3Q9Y6X2 628 aa11.2□□□□□ -0.62
TMEM54-203ENST00000463914 NUP210Q8TEM1 1887 aaPredicted RBP11.19□□□□□ -0.62
TMEM54-203ENST00000463914 KIF26AQ9ULI4 1882 aaPredicted RBP11.19□□□□□ -0.62
TMEM54-203ENST00000463914 H7C4K7 107 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 ZNF197O14709 1029 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 SLC16A4O15374 487 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 MCF2P10911 925 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 CPB1P15086 417 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 RPL9P32969 192 aaKnown RBP11.19□□□□□ -0.62
TMEM54-203ENST00000463914 SATB1Q01826 763 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 LMNB2Q03252 620 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 GAS6Q14393 721 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 TEAD2Q15562 447 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 CYP4A22Q5TCH4 519 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 TPGS2Q68CL5 300 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 RNF19BQ6ZMZ0 732 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 KCNK18Q7Z418 384 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 SHKBP1Q8TBC3 707 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 ZSCAN18Q8TBC5 510 aaPredicted RBP11.19□□□□□ -0.62
TMEM54-203ENST00000463914 DDX12PQ92771 950 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 IRF7Q92985 503 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 SECISBP2LQ93073 1101 aaKnown RBP11.19□□□□□ -0.62
TMEM54-203ENST00000463914 RSPRY1Q96DX4 576 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 TBC1D32Q96NH3 1257 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 PGLYRP2Q96PD5 576 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 TCHPQ9BT92 498 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 ZNF334Q9HCZ1 680 aaPredicted RBP11.19□□□□□ -0.62
TMEM54-203ENST00000463914 AFF4Q9UHB7 1163 aaKnown RBP11.19□□□□□ -0.62
TMEM54-203ENST00000463914 GMEB2Q9UKD1 530 aa11.19□□□□□ -0.62
TMEM54-203ENST00000463914 DCDC2BA2VCK2 349 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 SFI1A8K8P3 1242 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 ARNTLO00327 626 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 MAN2B1O00754 1011 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 MICAL2O94851 1124 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 VNN2O95498 520 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 OR4Q2P0C623 313 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 CXCL8P10145 99 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 PSMC3P17980 439 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 CCNE1P24864 410 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 CDC25AP30304 524 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 SOX9P48436 509 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 EPHA5P54756 1037 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 SPAG1Q07617 926 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 DMWDQ09019 674 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 RAD51AP2Q09MP3 1159 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 SPEM2Q0P670 501 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 NOLC1Q14978 699 aaKnown RBP eCLIP11.18□□□□□ -0.62
TMEM54-203ENST00000463914 SLC10A6Q3KNW5 377 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 WDR44Q5JSH3 913 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 IQCEQ6IPM2 695 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 ELMOD1Q8N336 334 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 IGSF22Q8N9C0 903 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 FBXO18Q8NFZ0 1043 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 DEPDC1BQ8WUY9 529 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 BORCS6Q96GS4 357 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 DRC1Q96MC2 740 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 FAM126AQ9BYI3 521 aaPredicted RBP11.18□□□□□ -0.62
TMEM54-203ENST00000463914 CRISPLD1Q9H336 500 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 SLITRK6Q9H5Y7 841 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 LMAN1LQ9HAT1 526 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 ASAH2Q9NR71 780 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 RBM12Q9NTZ6 932 aaKnown RBP11.18□□□□□ -0.62
TMEM54-203ENST00000463914 NOL7Q9UMY1 257 aaKnown RBP11.18□□□□□ -0.62
TMEM54-203ENST00000463914 PCDHB8Q9UN66 801 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 PCDHB6Q9Y5E3 794 aa11.18□□□□□ -0.62
TMEM54-203ENST00000463914 TIMM13Q9Y5L4 95 aaPredicted RBP11.18□□□□□ -0.62
TMEM54-203ENST00000463914 A0A1W2PRU2 124 aa11.17□□□□□ -0.62
TMEM54-203ENST00000463914 SLC38A8A6NNN8 435 aa11.17□□□□□ -0.62
TMEM54-203ENST00000463914 HEPACAM2A8MVW5 462 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms