RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ZC3H7AQ8IWR0 971 aaKnown RBP4.35□□□□□ -1.71
SCFD1-204ENST00000463622 GNRHR2Q96P88 292 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 TTYH1Q9H313 450 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-204ENST00000463622 RWDD1Q9H446 243 aaPredicted RBP4.35□□□□□ -1.71
SCFD1-204ENST00000463622 TMOD2Q9NZR1 351 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 DBNLQ9UJU6 430 aaKnown RBP4.35□□□□□ -1.71
SCFD1-204ENST00000463622 ATRNL1Q5VV63 1379 aa4.35□□□□□ -1.71
SCFD1-204ENST00000463622 ESYT3A0FGR9 886 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 CCDC66A2RUB6 948 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 ARVCFO00192 962 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 CTNND1O60716 968 aaKnown RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 GSPT1P15170 499 aaKnown RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 GCLCP48506 637 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 RGS3P49796 1198 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 TIMM10P62072 90 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 SMAD3P84022 425 aaKnown RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 NOLC1Q14978 699 aaKnown RBP eCLIP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 SURF1Q15526 300 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 CCDC57Q2TAC2 916 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 EP400NLQ6ZTU2 488 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 PLEKHH3Q7Z736 793 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 ZFPM1Q8IX07 1006 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 SCYL3Q8IZE3 742 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 CISD2Q8N5K1 135 aaKnown RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 ANKRD13CQ8N6S4 541 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 USP6NLQ92738 828 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 EDC3Q96F86 508 aaKnown RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 SRPK1Q96SB4 655 aaKnown RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 CNNM1Q9NRU3 951 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 AGTPBP1Q9UPW5 1226 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 COQ6Q9Y2Z9 468 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 FPGT-TNNI3KV9GXZ4 949 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 HMMRO75330 724 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 CIAO1O76071 339 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 RASGRP1O95267 797 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 MAP4K4O95819 1239 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 MC4RP32245 332 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 CSF2RBP32927 897 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 EPHB4P54760 987 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 GABREP78334 506 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 SEC23AQ15436 765 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 SHHQ15465 462 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 CRY1Q16526 586 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 C16orf59Q7L2K0 433 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 SPRED1Q7Z699 444 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 RALYLQ86SE5 291 aaKnown RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 AACSQ86V21 672 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 CIR1Q86X95 450 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 PALM2Q8IXS6 379 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 SLC7A14Q8TBB6 771 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 SMCR8Q8TEV9 937 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 TRIB2Q92519 343 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 KISS1RQ969F8 398 aaPredicted RBP4.34□□□□□ -1.71
SCFD1-204ENST00000463622 LRRC37BQ96QE4 947 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 IDI2Q9BXS1 227 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 SMURF1Q9HCE7 757 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 ARHGAP28Q9P2N2 729 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 MORF4L1Q9UBU8 362 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 MYRFQ9Y2G1 1151 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 ATP23Q9Y6H3 246 aa4.34□□□□□ -1.71
SCFD1-204ENST00000463622 ZSWIM8A7E2V4 1837 aa4.34□□□□□ -1.72
SCFD1-204ENST00000463622 MAST3O60307 1309 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 MROH5Q6ZUA9 1318 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 ARAP2Q8WZ64 1704 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 A0A1B0GUL7 405 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 PRAMEF25A6NGN4 478 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 H0Y858 1186 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 ENTPD3O75355 529 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 PDE8BO95263 885 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 CNOT4O95628 575 aaKnown RBP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 ADCY8P40145 1251 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 IL15P40933 162 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 PHKA1P46020 1223 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 RRADP55042 308 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 RBL2Q08999 1139 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 TCP10Q12799 353 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 CHAF1AQ13111 956 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 G3BP1Q13283 466 aaKnown RBP eCLIP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 OS9Q13438 667 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 CAVIN4Q5BKX8 364 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 TAF7LQ5H9L4 462 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 METTL24Q5JXM2 366 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 TREML2Q5T2D2 321 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 FSTL4Q6MZW2 842 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 GADL1Q6ZQY3 521 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 NLGN4XQ8N0W4 816 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 SH3RF3Q8TEJ3 882 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 FAM122AQ96E09 287 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 KIF1BPQ96EK5 621 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 WWC2-AS2Q96NR7 200 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 LBHD1Q9BQE6 289 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 LRRCC1Q9C099 1032 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 MEGF9Q9H1U4 602 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 TMPRSS5Q9H3S3 457 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 CHMP4BQ9H444 224 aaKnown RBP4.33□□□□□ -1.72
SCFD1-204ENST00000463622 ZNF561-AS1K7EIQ3 104 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 WNT9AO14904 365 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 MATN3O15232 486 aa4.33□□□□□ -1.72
SCFD1-204ENST00000463622 PDE1AP54750 535 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms