RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 ERVK-5Q9HDB9 667 aa20.4■□□□□ 0.86
CCDC78-206ENST00000463539 DPP3Q9NY33 737 aa20.4■□□□□ 0.86
CCDC78-206ENST00000463539 PADI3Q9ULW8 664 aa20.4■□□□□ 0.86
CCDC78-206ENST00000463539 PCDHB2Q9Y5E7 798 aa20.4■□□□□ 0.86
CCDC78-206ENST00000463539 SGPL1O95470 568 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 CKBP12277 381 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 ZSCAN20P17040 1043 aaPredicted RBP20.39■□□□□ 0.86
CCDC78-206ENST00000463539 ACO1P21399 889 aaKnown RBP20.39■□□□□ 0.86
CCDC78-206ENST00000463539 TNFAIP3P21580 790 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 POLR2BP30876 1174 aaKnown RBP20.39■□□□□ 0.86
CCDC78-206ENST00000463539 NAB2Q15742 525 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 ALKAL1Q6UXT8 129 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 USP38Q8NB14 1042 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 OLIG1Q8TAK6 271 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 CXorf38Q8TB03 319 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 SLC20A1Q8WUM9 679 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 ZMAT2Q96NC0 199 aaKnown RBP20.39■□□□□ 0.86
CCDC78-206ENST00000463539 CXCL16Q9H2A7 254 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 RNF39Q9H2S5 420 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 SEPT11Q9NVA2 429 aaKnown RBP20.39■□□□□ 0.86
CCDC78-206ENST00000463539 DNAI1Q9UI46 699 aa20.39■□□□□ 0.86
CCDC78-206ENST00000463539 NOCTQ9UK39 431 aaKnown RBP20.39■□□□□ 0.86
CCDC78-206ENST00000463539 CYP11B1P15538 503 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 ATICP31939 592 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 GUCY2FP51841 1108 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 GLRA4Q5JXX5 417 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 NOP9Q86U38 636 aaKnown RBP20.39■□□□□ 0.85
CCDC78-206ENST00000463539 HACE1Q8IYU2 909 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 SLC30A5Q8TAD4 765 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 U2AF1L4Q8WU68 220 aaKnown RBP20.39■□□□□ 0.85
CCDC78-206ENST00000463539 ACP6Q9NPH0 428 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 FAM105AQ9NUU6 356 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 MYO1AQ9UBC5 1043 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 NENFQ9UMX5 172 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 PCDHB4Q9Y5E5 795 aa20.39■□□□□ 0.85
CCDC78-206ENST00000463539 PJA2O43164 708 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 ASPAP45381 313 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 RBP5P82980 135 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 ZNF667Q5HYK9 610 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 CTU1Q7Z7A3 348 aaKnown RBP20.38■□□□□ 0.85
CCDC78-206ENST00000463539 TMEM130Q8N3G9 435 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 BEST2Q8NFU1 509 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 OSBPL7Q9BZF2 842 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 KLK14Q9P0G3 267 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 NXF1Q9UBU9 619 aaKnown RBP20.38■□□□□ 0.85
CCDC78-206ENST00000463539 AGAP1Q9UPQ3 857 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 SQORQ9Y6N5 450 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 ANK1P16157 1881 aa20.38■□□□□ 0.85
CCDC78-206ENST00000463539 CDK7P50613 346 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 BPIFB4P59827 614 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 WDR72Q3MJ13 1102 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 TAF3Q5VWG9 929 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 TMEM270Q6UE05 265 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 SCARA5Q6ZMJ2 495 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 RPUSD2Q8IZ73 545 aaKnown RBP20.37■□□□□ 0.85
CCDC78-206ENST00000463539 HPDLQ96IR7 371 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 WDR24Q96S15 920 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 TSPAN18Q96SJ8 248 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 VRTNQ9H8Y1 702 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 TUBGCP4Q9UGJ1 667 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 UBQLN1Q9UMX0 589 aaKnown RBP20.37■□□□□ 0.85
CCDC78-206ENST00000463539 MACROD2A1Z1Q3 448 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 KCNE1P15382 129 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 ZBTB6Q15916 424 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 XKR4Q5GH76 650 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 ZNF569Q5MCW4 686 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 RBBP8NLQ8NC74 664 aaPredicted RBP20.37■□□□□ 0.85
CCDC78-206ENST00000463539 CAGE1Q8TC20 777 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 SECISBP2LQ93073 1101 aaKnown RBP20.37■□□□□ 0.85
CCDC78-206ENST00000463539 FAXDC2Q96IV6 333 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 CNTN6Q9UQ52 1028 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 PAXBP1Q9Y5B6 917 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 DUSP10Q9Y6W6 482 aa20.37■□□□□ 0.85
CCDC78-206ENST00000463539 SMIM28A0A1B0GU29 152 aa20.36■□□□□ 0.85
CCDC78-206ENST00000463539 XPOTO43592 962 aaKnown RBP20.36■□□□□ 0.85
CCDC78-206ENST00000463539 P4HA1P13674 534 aa20.36■□□□□ 0.85
CCDC78-206ENST00000463539 CD58P19256 250 aa20.36■□□□□ 0.85
CCDC78-206ENST00000463539 YWHAEP62258 255 aaKnown RBP20.36■□□□□ 0.85
CCDC78-206ENST00000463539 CDR2Q01850 454 aa20.36■□□□□ 0.85
CCDC78-206ENST00000463539 FAM126BQ8IXS8 530 aa20.36■□□□□ 0.85
CCDC78-206ENST00000463539 UBR7Q8N806 425 aa20.36■□□□□ 0.85
CCDC78-206ENST00000463539 C18orf25Q96B23 403 aaPredicted RBP20.36■□□□□ 0.85
CCDC78-206ENST00000463539 PACSIN1Q9BY11 444 aa20.36■□□□□ 0.85
CCDC78-206ENST00000463539 CISHQ9NSE2 258 aa20.36■□□□□ 0.85
CCDC78-206ENST00000463539 ATP8B3O60423 1300 aa20.36■□□□□ 0.85
CCDC78-206ENST00000463539 STAU1O95793 577 aaKnown RBP20.35■□□□□ 0.85
CCDC78-206ENST00000463539 ITGA4P13612 1032 aa20.35■□□□□ 0.85
CCDC78-206ENST00000463539 RAB27AP51159 221 aa20.35■□□□□ 0.85
CCDC78-206ENST00000463539 MYO1EQ12965 1108 aa20.35■□□□□ 0.85
CCDC78-206ENST00000463539 FBXO46Q6PJ61 603 aaPredicted RBP20.35■□□□□ 0.85
CCDC78-206ENST00000463539 TRAF7Q6Q0C0 670 aa20.35■□□□□ 0.85
CCDC78-206ENST00000463539 PALB2Q86YC2 1186 aa20.35■□□□□ 0.85
CCDC78-206ENST00000463539 TRAIPQ9BWF2 469 aa20.35■□□□□ 0.85
CCDC78-206ENST00000463539 POLIQ9UNA4 740 aa20.35■□□□□ 0.85
CCDC78-206ENST00000463539 H2AFZP0C0S5 128 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 WEE2P0C1S8 567 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 HSPA8P11142 646 aaKnown RBP20.34■□□□□ 0.85
CCDC78-206ENST00000463539 CHRNB2P17787 502 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 CASQ1P31415 396 aa20.34■□□□□ 0.85
CCDC78-206ENST00000463539 SMYD5Q6GMV2 418 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms