RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 AVENQ9NQS1 362 aaPredicted RBP16.74■□□□□ 0.27
CMSS1-202ENST00000463526 CNTN3Q9P232 1028 aa16.74■□□□□ 0.27
CMSS1-202ENST00000463526 NCDNQ9UBB6 729 aa16.74■□□□□ 0.27
CMSS1-202ENST00000463526 ZNF292O60281 2723 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 OTOGLQ3ZCN5 2332 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 MED19A0JLT2 244 aaPredicted RBP16.73■□□□□ 0.27
CMSS1-202ENST00000463526 ZNF197O14709 1029 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 CPB1P15086 417 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 PROZP22891 400 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 U2AF2P26368 475 aaKnown RBP eCLIP16.73■□□□□ 0.27
CMSS1-202ENST00000463526 MARCKSP29966 332 aaPredicted RBP16.73■□□□□ 0.27
CMSS1-202ENST00000463526 TWF1Q12792 350 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 MRPL58Q14197 206 aaKnown RBP16.73■□□□□ 0.27
CMSS1-202ENST00000463526 SLC10A6Q3KNW5 377 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 ZNF528Q3MIS6 628 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 MCTP1Q6DN14 999 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 IQCEQ6IPM2 695 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 ZNF280DQ6N043 979 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 DDX12PQ92771 950 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 SUSD3Q96L08 255 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 ZNF512Q96ME7 567 aaPredicted RBP16.73■□□□□ 0.27
CMSS1-202ENST00000463526 ZSWIM3Q96MP5 696 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 TRMT61BQ9BVS5 477 aaKnown RBP16.73■□□□□ 0.27
CMSS1-202ENST00000463526 DAXXQ9UER7 740 aaPredicted RBP16.73■□□□□ 0.27
CMSS1-202ENST00000463526 TUBGCP4Q9UGJ1 667 aa16.73■□□□□ 0.27
CMSS1-202ENST00000463526 MRPS17Q9Y2R5 130 aaKnown RBP16.73■□□□□ 0.27
CMSS1-202ENST00000463526 TIMM13Q9Y5L4 95 aaPredicted RBP16.73■□□□□ 0.27
CMSS1-202ENST00000463526 DCHS1Q96JQ0 3298 aa16.72■□□□□ 0.27
CMSS1-202ENST00000463526 FCARP24071 287 aa16.72■□□□□ 0.27
CMSS1-202ENST00000463526 GDI1P31150 447 aa16.72■□□□□ 0.27
CMSS1-202ENST00000463526 VIPR2P41587 438 aa16.72■□□□□ 0.27
CMSS1-202ENST00000463526 MAGEA9P43362 315 aa16.72■□□□□ 0.27
CMSS1-202ENST00000463526 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
CMSS1-202ENST00000463526 NOLC1Q14978 699 aaKnown RBP eCLIP16.72■□□□□ 0.27
CMSS1-202ENST00000463526 TPGS2Q68CL5 300 aa16.72■□□□□ 0.27
CMSS1-202ENST00000463526 APPL2Q8NEU8 664 aa16.72■□□□□ 0.27
CMSS1-202ENST00000463526 CLDN23Q96B33 292 aa16.72■□□□□ 0.27
CMSS1-202ENST00000463526 SH2B1Q9NRF2 756 aaPredicted RBP16.72■□□□□ 0.27
CMSS1-202ENST00000463526 CEP72Q9P209 647 aa16.72■□□□□ 0.27
CMSS1-202ENST00000463526 MIA3Q5JRA6 1907 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 NPHP3-ACAD11A0A0J9YXS1 232 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 SHISA7A6NL88 538 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 SPTLC1O15269 473 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 TOM1L1O75674 476 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 OR4Q2P0C623 313 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 CXCL8P10145 99 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 PLS3P13797 630 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 SMTNP53814 917 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 MTAPQ13126 283 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 FZD5Q13467 585 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 PUM1Q14671 1186 aaKnown RBP eCLIP16.71■□□□□ 0.27
CMSS1-202ENST00000463526 RSPO4Q2I0M5 234 aaPredicted RBP16.71■□□□□ 0.27
CMSS1-202ENST00000463526 RNF19BQ6ZMZ0 732 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 GPIHBP1Q8IV16 184 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 TMEM161BQ8NDZ6 487 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 BICD1Q96G01 975 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 ASB16Q96NS5 453 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 PGLYRP2Q96PD5 576 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 PNMA5Q96PV4 448 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 C17orf75Q9HAS0 396 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.71■□□□□ 0.27
CMSS1-202ENST00000463526 ZSCAN32Q9NX65 697 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 AFF4Q9UHB7 1163 aaKnown RBP16.71■□□□□ 0.27
CMSS1-202ENST00000463526 PCDHB8Q9UN66 801 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 PCDHGA2Q9Y5H1 932 aa16.71■□□□□ 0.27
CMSS1-202ENST00000463526 LAD1O00515 517 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 CLDN3O15551 220 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 MOSPD3O75425 235 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 MAPTP10636 758 aaKnown RBP16.7■□□□□ 0.26
CMSS1-202ENST00000463526 GUCY2CP25092 1073 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 PRPHP41219 470 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 GUCY2FP51841 1108 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 TEAD2Q15562 447 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 VITQ6UXI7 678 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 SPIRE2Q8WWL2 714 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 DNASE1L2Q92874 299 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 SMARCD2Q92925 531 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 KIF12Q96FN5 646 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 NTPCRQ9BSD7 190 aaKnown RBP16.7■□□□□ 0.26
CMSS1-202ENST00000463526 SLITRK6Q9H5Y7 841 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 ASAH2Q9NR71 780 aa16.7■□□□□ 0.26
CMSS1-202ENST00000463526 MAN2B1O00754 1011 aa16.69■□□□□ 0.26
CMSS1-202ENST00000463526 PSMC3P17980 439 aa16.69■□□□□ 0.26
CMSS1-202ENST00000463526 RPS9P46781 194 aaKnown RBP16.69■□□□□ 0.26
CMSS1-202ENST00000463526 ZBTB44Q8NCP5 570 aa16.69■□□□□ 0.26
CMSS1-202ENST00000463526 ZSCAN18Q8TBC5 510 aaPredicted RBP16.69■□□□□ 0.26
CMSS1-202ENST00000463526 FAM3CQ92520 227 aa16.69■□□□□ 0.26
CMSS1-202ENST00000463526 IRF7Q92985 503 aa16.69■□□□□ 0.26
CMSS1-202ENST00000463526 CDK5RAP3Q96JB5 506 aa16.69■□□□□ 0.26
CMSS1-202ENST00000463526 TIPINQ9BVW5 301 aa16.69■□□□□ 0.26
CMSS1-202ENST00000463526 HAPLN2Q9GZV7 340 aa16.69■□□□□ 0.26
CMSS1-202ENST00000463526 LMAN1LQ9HAT1 526 aa16.69■□□□□ 0.26
CMSS1-202ENST00000463526 ZNF334Q9HCZ1 680 aaPredicted RBP16.69■□□□□ 0.26
CMSS1-202ENST00000463526 SMG5Q9UPR3 1016 aaKnown RBP16.69■□□□□ 0.26
CMSS1-202ENST00000463526 YIPF1Q9Y548 306 aa16.69■□□□□ 0.26
CMSS1-202ENST00000463526 CEP250Q9BV73 2442 aa16.68■□□□□ 0.26
CMSS1-202ENST00000463526 F5P12259 2224 aa16.68■□□□□ 0.26
CMSS1-202ENST00000463526 VWA3AA6NCI4 1184 aa16.68■□□□□ 0.26
CMSS1-202ENST00000463526 ZNF263O14978 683 aa16.68■□□□□ 0.26
CMSS1-202ENST00000463526 MICAL2O94851 1124 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms