RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ZBTB44Q8NCP5 570 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 APPL2Q8NEU8 664 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 SUSD3Q96L08 255 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 NTPCRQ9BSD7 190 aaKnown RBP21.63■■□□□ 1.05
VARS-221ENST00000463184 RUSC1Q9BVN2 902 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 INSL5Q9Y5Q6 135 aa21.63■■□□□ 1.05
VARS-221ENST00000463184 MAN2B1O00754 1011 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 SEC24AO95486 1093 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 FCARP24071 287 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 TOB1P50616 345 aaPredicted RBP21.62■■□□□ 1.05
VARS-221ENST00000463184 MAPK7Q13164 816 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 FZD5Q13467 585 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 IQCEQ6IPM2 695 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 ZNF280DQ6N043 979 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 GPR161Q8N6U8 529 aaKnown RBP21.62■■□□□ 1.05
VARS-221ENST00000463184 NELL1Q92832 810 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 C18orf25Q96B23 403 aaPredicted RBP21.62■■□□□ 1.05
VARS-221ENST00000463184 TCEAL4Q96EI5 215 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 ZNF512Q96ME7 567 aaPredicted RBP21.62■■□□□ 1.05
VARS-221ENST00000463184 TRMT61BQ9BVS5 477 aaKnown RBP21.62■■□□□ 1.05
VARS-221ENST00000463184 BRD9Q9H8M2 597 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 DLL3Q9NYJ7 618 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 PCDHB6Q9Y5E3 794 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 CACNA1AO00555 2505 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 PATJQ8NI35 1801 aa21.62■■□□□ 1.05
VARS-221ENST00000463184 SLC16A4O15374 487 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 TOM1L1O75674 476 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 MCM4P33991 863 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 PRPHP41219 470 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 STRN3Q13033 797 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 FAM78AQ5JUQ0 283 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 LEMD2Q8NC56 503 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 DDX12PQ92771 950 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 IRF7Q92985 503 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 SECISBP2LQ93073 1101 aaKnown RBP21.61■■□□□ 1.05
VARS-221ENST00000463184 ZBTB45Q96K62 511 aaPredicted RBP21.61■■□□□ 1.05
VARS-221ENST00000463184 ASB16Q96NS5 453 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 SH2B1Q9NRF2 756 aaPredicted RBP21.61■■□□□ 1.05
VARS-221ENST00000463184 NCDNQ9UBB6 729 aa21.61■■□□□ 1.05
VARS-221ENST00000463184 AFF4Q9UHB7 1163 aaKnown RBP21.61■■□□□ 1.05
VARS-221ENST00000463184 SHISA7A6NL88 538 aa21.6■■□□□ 1.05
VARS-221ENST00000463184 LILRB5O75023 590 aa21.6■■□□□ 1.05
VARS-221ENST00000463184 GUCY2CP25092 1073 aa21.6■■□□□ 1.05
VARS-221ENST00000463184 CCR2P41597 374 aa21.6■■□□□ 1.05
VARS-221ENST00000463184 SLC10A6Q3KNW5 377 aa21.6■■□□□ 1.05
VARS-221ENST00000463184 DTHD1Q6ZMT9 781 aa21.6■■□□□ 1.05
VARS-221ENST00000463184 SPIRE2Q8WWL2 714 aa21.6■■□□□ 1.05
VARS-221ENST00000463184 FAM126AQ9BYI3 521 aaPredicted RBP21.6■■□□□ 1.05
VARS-221ENST00000463184 TRPV5Q9NQA5 729 aa21.6■■□□□ 1.05
VARS-221ENST00000463184 PRMT8Q9NR22 394 aaPredicted RBP21.6■■□□□ 1.05
VARS-221ENST00000463184 MED19A0JLT2 244 aaPredicted RBP21.59■■□□□ 1.05
VARS-221ENST00000463184 SFI1A8K8P3 1242 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 PP2D1A8MPX8 630 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 CITO14578 2027 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 MEFVO15553 781 aaPredicted RBP21.59■■□□□ 1.05
VARS-221ENST00000463184 HARSP12081 509 aaKnown RBP21.59■■□□□ 1.05
VARS-221ENST00000463184 PSMC3P17980 439 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 MARCKSP29966 332 aaPredicted RBP21.59■■□□□ 1.05
VARS-221ENST00000463184 CDC25AP30304 524 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 SMTNP53814 917 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 GRM2Q14416 872 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 NOLC1Q14978 699 aaKnown RBP eCLIP21.59■■□□□ 1.05
VARS-221ENST00000463184 IL17AQ16552 155 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 MAMSTRQ6ZN01 415 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 KCTD17Q8N5Z5 321 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 SMARCD2Q92925 531 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 MMTAG2Q9BU76 263 aaKnown RBP21.59■■□□□ 1.05
VARS-221ENST00000463184 EPC1Q9H2F5 836 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 PCDHB8Q9UN66 801 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 DNAH14Q0VDD8 3507 aa21.59■■□□□ 1.05
VARS-221ENST00000463184 PLS3P13797 630 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 EPHA5P54756 1037 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 TWF1Q12792 350 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 MTAPQ13126 283 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 RSPO4Q2I0M5 234 aaPredicted RBP21.58■■□□□ 1.05
VARS-221ENST00000463184 KCNK18Q7Z418 384 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 MAP4K3Q8IVH8 894 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 HS6ST3Q8IZP7 471 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 ZNF687Q8N1G0 1237 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 TMEM161BQ8NDZ6 487 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 DEPDC1BQ8WUY9 529 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 IER2Q9BTL4 223 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 OXCT2Q9BYC2 517 aaPredicted RBP21.58■■□□□ 1.05
VARS-221ENST00000463184 PLEKHA5Q9HAU0 1116 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 ZNF334Q9HCZ1 680 aaPredicted RBP21.58■■□□□ 1.05
VARS-221ENST00000463184 CEP72Q9P209 647 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 ANKFY1Q9P2R3 1169 aa21.58■■□□□ 1.05
VARS-221ENST00000463184 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.58■■□□□ 1.05
VARS-221ENST00000463184 GPR179Q6PRD1 2367 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 CLDN3O15551 220 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 CPB1P15086 417 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 SDHBP21912 280 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 MCL1Q07820 350 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 PPP2R5DQ14738 602 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 TSSK4Q6SA08 328 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 VITQ6UXI7 678 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 ZPBP2Q6X784 338 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 ZSWIM3Q96MP5 696 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 GPR88Q9GZN0 384 aa21.57■■□□□ 1.04
VARS-221ENST00000463184 CHRDQ9H2X0 955 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms