RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 TMEM139Q8IV31 216 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 PPIL6Q8IXY8 311 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 PIGBQ92521 554 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 SH3GL2Q99962 352 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 ABCF3Q9NUQ8 709 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 A0A0U1RQJ8 604 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 ENO3P13929 434 aaPredicted RBP16.62■□□□□ 0.25
SMC4-204ENST00000462787 DRD4P21917 467 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 PMS1P54277 932 aaKnown RBP16.62■□□□□ 0.25
SMC4-204ENST00000462787 EPHA7Q15375 998 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 GRID1Q9ULK0 1009 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 CDY2AQ9Y6F7 541 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 CDY1Q9Y6F8 540 aa16.62■□□□□ 0.25
SMC4-204ENST00000462787 XPO1O14980 1071 aaKnown RBP16.61■□□□□ 0.25
SMC4-204ENST00000462787 ITGA4P13612 1032 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 CHI3L2Q15782 390 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 MTERF2Q49AM1 385 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 HAUS6Q7Z4H7 955 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 FRMD8Q9BZ67 464 aaPredicted RBP16.61■□□□□ 0.25
SMC4-204ENST00000462787 TBC1D22BQ9NU19 505 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 BFARQ9NZS9 450 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 ABLIM1O14639 778 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 KRT8P05787 483 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 IFI35P80217 286 aaPredicted RBP16.61■□□□□ 0.25
SMC4-204ENST00000462787 GRB10Q13322 594 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 ZNF394Q53GI3 561 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 GPD1LQ8N335 351 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 SEC24DO94855 1032 aaPredicted RBP16.61■□□□□ 0.25
SMC4-204ENST00000462787 GDF11O95390 407 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 KLHL8Q9P2G9 620 aaPredicted RBP16.61■□□□□ 0.25
SMC4-204ENST00000462787 ANGPTL3Q9Y5C1 460 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 PCDHGC5Q9Y5F6 944 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 CAMSAP1Q5T5Y3 1602 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 TM9SF1O15321 606 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 KRT75O95678 551 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 CCND2P30279 289 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 RIPK1Q13546 671 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 PIGHQ14442 188 aaPredicted RBP16.61■□□□□ 0.25
SMC4-204ENST00000462787 PRCCQ92733 491 aaPredicted RBP16.61■□□□□ 0.25
SMC4-204ENST00000462787 AS3MTQ9HBK9 375 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 PCMTD2Q9NV79 361 aa16.61■□□□□ 0.25
SMC4-204ENST00000462787 H0Y626 953 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 INO80B-WBP1J3KQ70 363 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 AIM2O14862 343 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 ZNF189O75820 626 aaPredicted RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 TRIM16O95361 564 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 XRCC4Q13426 336 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 FLOT2Q14254 428 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 CLEC4GQ6UXB4 293 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 TMPRSS6Q8IU80 811 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 CNBD2Q96M20 576 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 ZBTB18Q99592 522 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 SIKE1Q9BRV8 207 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 LXNQ9BS40 222 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 INO80BQ9C086 356 aaPredicted RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 DDX28Q9NUL7 540 aaKnown RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 HSPBP1Q9NZL4 362 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 BLOC1S6Q9UL45 172 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 NAALADL1Q9UQQ1 740 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 QARSP47897 775 aaKnown RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 SERPINB8P50452 374 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 MRPS15P82914 257 aaKnown RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 ZBTB33Q86T24 672 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 ATP8B4Q8TF62 1192 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 TIPINQ9BVW5 301 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 XPOTO43592 962 aaKnown RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 SERPINB2P05120 415 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 MYL2P10916 166 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 RALAP11233 206 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 C11orf63Q6NUN7 778 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 ZNF677Q86XU0 584 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 C1orf131Q8NDD1 294 aaKnown RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 ZNF483Q8TF39 744 aaPredicted RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 AURKCQ9UQB9 309 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 SORBS3O60504 671 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 RASA2Q15283 850 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 GPR141Q7Z602 305 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 ZNF507Q8TCN5 953 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 NSUN4Q96CB9 384 aaKnown RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 ZNF184Q99676 751 aaPredicted RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 MYLK2Q9H1R3 596 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 RPL26L1Q9UNX3 145 aaKnown RBP16.6■□□□□ 0.25
SMC4-204ENST00000462787 ADGRA3Q8IWK6 1321 aa16.6■□□□□ 0.25
SMC4-204ENST00000462787 AKAP10O43572 662 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 BMP6P22004 513 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 CDH6P55285 790 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 FAM47CQ5HY64 1035 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 EFHC1Q5JVL4 640 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 EP400NLQ6ZTU2 488 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 HACE1Q8IYU2 909 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 TERB1Q8NA31 727 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 FAM111AQ96PZ2 611 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 TMEM120AQ9BXJ8 343 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 CAAP1Q9H8G2 361 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 MYO3BQ8WXR4 1341 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 ZC3H13Q5T200 1668 aaKnown RBP16.59■□□□□ 0.25
SMC4-204ENST00000462787 BBOX1O75936 387 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 UNC5CO95185 931 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 EPHB2P29323 1055 aa16.59■□□□□ 0.25
SMC4-204ENST00000462787 SDC4P31431 198 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms