RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 PPIGQ13427 754 aaKnown RBP eCLIP19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 IKBKEQ14164 716 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 PDXDC1Q6P996 788 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 NOA1Q8NC60 698 aaKnown RBP19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 BAP1Q92560 729 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 LPPQ93052 612 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 ACAP3Q96P50 834 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 RHOXF2Q9BQY4 288 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 MKNK1Q9BUB5 465 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 RNF39Q9H2S5 420 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 RPF1Q9H9Y2 349 aaKnown RBP19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 CEP72Q9P209 647 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 ARHGAP20Q9P2F6 1191 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 PARP2Q9UGN5 583 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 CEP290O15078 2479 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 RCCD1A6NED2 376 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 RAB27AP51159 221 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 KYAT1Q16773 422 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 SLC24A5Q71RS6 500 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 CCDC127Q96BQ5 260 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 LBHD1Q9BQE6 289 aaPredicted RBP19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 TRAIPQ9BWF2 469 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 MMRN2Q9H8L6 949 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 VIPAS39Q9H9C1 493 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 ABCB6Q9NP58 842 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 FAM207AQ9NSI2 230 aaPredicted RBP19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 ARMCX3Q9UH62 379 aaPredicted RBP19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 PCDHA13Q9Y5I0 950 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 NR2E3Q9Y5X4 410 aa19.42■□□□□ 0.7
ATPAF2-202ENST00000462733 C9IYK1 514 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 RECQL4O94761 1208 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 PFKMP08237 780 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 ITGA4P13612 1032 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 CYP24A1Q07973 514 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 ENOX2Q16206 610 aaKnown RBP19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 ECHDC2Q86YB7 292 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 ALS2CR12Q96Q35 445 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 DEF6Q9H4E7 631 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 LUC7LQ9NQ29 371 aaKnown RBP19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 C1orf112Q9NSG2 853 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 PSD3Q9NYI0 1048 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 KLK14Q9P0G3 267 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 ANK1P16157 1881 aa19.41■□□□□ 0.7
ATPAF2-202ENST00000462733 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 MEIS3P2A8K0S8 358 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 ZNF263O14978 683 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 SKIP12755 728 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 KRT13P13646 458 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 EIF4A3P38919 411 aaKnown RBP19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 YARSP54577 528 aaKnown RBP19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 WNT7BP56706 349 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 FRMD5Q7Z6J6 570 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 BRSK2Q8IWQ3 736 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 HACE1Q8IYU2 909 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 BORCS6Q96GS4 357 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 MFSD14AQ96MC6 490 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 METTL14Q9HCE5 456 aaKnown RBP19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 PDE11AQ9HCR9 933 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 SNX12Q9UMY4 172 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 TTC3P53804 2025 aa19.4■□□□□ 0.7
ATPAF2-202ENST00000462733 LRRC53A6NM62 1247 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 EPHB6O15197 1021 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 MAPK13O15264 365 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 AKR1B10O60218 316 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 ZNF623O75123 536 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 ATF7P17544 494 aaPredicted RBP19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 EPHB4P54760 987 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 SLC10A6Q3KNW5 377 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 DCAF17Q5H9S7 520 aaPredicted RBP19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 TCERG1LQ5VWI1 586 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 CCDC70Q6NSX1 233 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 INTS8Q75QN2 995 aaKnown RBP19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 C16orf59Q7L2K0 433 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 OTOP2Q7RTS6 562 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 CACNA2D4Q7Z3S7 1137 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 MRPL10Q7Z7H8 261 aaKnown RBP19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 TRIM59Q8IWR1 403 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 EXOC4Q96A65 974 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 MMS19Q96T76 1030 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 RNF19AQ9NV58 838 aa19.39■□□□□ 0.7
ATPAF2-202ENST00000462733 ENC1O14682 589 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 POLR3GO15318 223 aaPredicted RBP19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 MEFVO15553 781 aaPredicted RBP19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 CAPN15O75808 1086 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 DLATP10515 647 aaKnown RBP19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 ACTN1P12814 892 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 TCP1P17987 556 aaKnown RBP19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 VAMP7P51809 220 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 DLG4P78352 724 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 CYP27A1Q02318 531 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 BFSP1Q12934 665 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 ASTE1Q2TB18 679 aaPredicted RBP19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 ZNF365Q70YC5 407 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 RRAGAQ7L523 313 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 RNF10Q8N5U6 811 aaKnown RBP19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 PLEKHO2Q8TD55 490 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 PGBD4Q96DM1 585 aa19.39■□□□□ 0.69
ATPAF2-202ENST00000462733 CXCL16Q9H2A7 254 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms