RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 LCP1P13796 627 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 PDE6AP16499 860 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 TNFRSF1AP19438 455 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 RAB27AP51159 221 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 TCP10Q12799 353 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 KCNAB2Q13303 367 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 DLGAP5Q15398 846 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 CPZQ66K79 652 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 CDC42EP5Q6NZY7 148 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 BORAQ6PGQ7 559 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 CCDC129Q6ZRS4 1044 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 MILR1Q7Z6M3 343 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 WDR75Q8IWA0 830 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 CNTD1Q8N815 330 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 PCDH19Q8TAB3 1148 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 SH3RF3Q8TEJ3 882 aaPredicted RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 DPF2Q92785 391 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 NSUN4Q96CB9 384 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 ZNF830Q96NB3 372 aaPredicted RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 SMAD5Q99717 465 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 SYT3Q9BQG1 590 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 SSBP3Q9BWW4 388 aaPredicted RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 IL25Q9H293 177 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 ARMT1Q9H993 441 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 PAG1Q9NWQ8 432 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 AATFQ9NY61 560 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 ZNF70Q9UC06 446 aaPredicted RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 ABT1Q9ULW3 272 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 APOBEC2Q9Y235 224 aaKnown RBP5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 COQ6Q9Y2Z9 468 aa5.59□□□□□ -1.51
ATPAF1-203ENST00000460928 DOCK2Q92608 1830 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 ZNF532Q9HCE3 1301 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 CYP2D7A0A087X1C5 515 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 TCRBV5S4A2TA0A5A2 114 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 CA12O43570 354 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 PRC1O43663 620 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 GAS7O60861 476 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 FKBP9O95302 570 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 CKMP06732 381 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 CYP2D6P10635 497 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 FPR2P25090 351 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 RPS12P25398 132 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 BTDP43251 543 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 TBX4P57082 545 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 IL2P60568 153 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 DSG1Q02413 1049 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 PAK1Q13153 545 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 PICALMQ13492 652 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 LRRC41Q15345 812 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 SHROOM1Q2M3G4 852 aaPredicted RBP5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 CR1LQ2VPA4 569 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 SLC9C2Q5TAH2 1124 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 NAA16Q6N069 864 aaPredicted RBP5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 FKBP9P1Q75LS8 142 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 CENPQQ7L2Z9 268 aaPredicted RBP5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 DZIP1Q86YF9 867 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 MAPKAPK5Q8IW41 473 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 CNTROBQ8N137 903 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 LCORLQ8N3X6 602 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 TXNDC5Q8NBS9 432 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 RCBTB1Q8NDN9 531 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 COG1Q8WTW3 980 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 TBC1D22AQ8WUA7 517 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 TEKT1Q969V4 418 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 RILPL2Q969X0 211 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 FAM227BQ96M60 508 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 YIPF4Q9BSR8 244 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 ALG1Q9BT22 464 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 TMEM39BQ9GZU3 492 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 CABP5Q9NP86 173 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 DDX4Q9NQI0 724 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 STAP2Q9UGK3 403 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 SAP30BPQ9UHR5 308 aaKnown RBP5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 TRHDEQ9UKU6 1024 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 INVSQ9Y283 1065 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 ZKSCAN5Q9Y2L8 839 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 MYH7P12883 1935 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 AK9Q5TCS8 1911 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 CDK5RAP2Q96SN8 1893 aa5.58□□□□□ -1.52
ATPAF1-203ENST00000460928 MROH7-TTC4A0A0A0MT08 1334 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 SALL1Q9NSC2 1324 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 A0A0D9SFI3 127 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 AKAP10O43572 662 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 MYO1BO43795 1136 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 WDHD1O75717 1129 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 MBD4O95243 580 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 ZNF20P17024 532 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 ZNF28P17035 718 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 ADCYAP1R1P41586 468 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 RHBDL3P58872 404 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 FKBP1AP62942 108 aaKnown RBP5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 NKX3-2P78367 333 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 ADAM9Q13443 819 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 KIZQ2M2Z5 673 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 SYDE2Q5VT97 1194 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 CST9Q5W186 159 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 MCTP2Q6DN12 878 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 USP50Q70EL3 339 aaPredicted RBP5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 CEP68Q76N32 757 aa5.57□□□□□ -1.52
ATPAF1-203ENST00000460928 PASD1Q8IV76 773 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms