RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 POU5F1Q01860 360 aaKnown RBP18.08■□□□□ 0.49
NELFCD-201ENST00000460601 NYAP1Q6ZVC0 841 aa18.08■□□□□ 0.49
NELFCD-201ENST00000460601 GLYCTKQ8IVS8 523 aa18.08■□□□□ 0.49
NELFCD-201ENST00000460601 RNF169Q8NCN4 708 aa18.08■□□□□ 0.49
NELFCD-201ENST00000460601 ARMC5Q96C12 935 aa18.08■□□□□ 0.49
NELFCD-201ENST00000460601 ADAM2Q99965 735 aa18.08■□□□□ 0.49
NELFCD-201ENST00000460601 IFIH1Q9BYX4 1025 aaKnown RBP18.08■□□□□ 0.49
NELFCD-201ENST00000460601 LACRTQ9GZZ8 138 aa18.08■□□□□ 0.49
NELFCD-201ENST00000460601 PLEKHA5Q9HAU0 1116 aa18.08■□□□□ 0.49
NELFCD-201ENST00000460601 AGAP1Q9UPQ3 857 aa18.08■□□□□ 0.49
NELFCD-201ENST00000460601 DUSP10Q9Y6W6 482 aa18.08■□□□□ 0.49
NELFCD-201ENST00000460601 RALGAPA2Q2PPJ7 1873 aa18.08■□□□□ 0.49
NELFCD-201ENST00000460601 WEE2P0C1S8 567 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 CD58P19256 250 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 ASPAP45381 313 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 RAP1GAPP47736 663 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 SOX4Q06945 474 aaPredicted RBP18.08■□□□□ 0.48
NELFCD-201ENST00000460601 GPNMBQ14956 572 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 ZBTB6Q15916 424 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 SGSM1Q2NKQ1 1148 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 WDR72Q3MJ13 1102 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 TAF3Q5VWG9 929 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 SLC39A5Q6ZMH5 540 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 LRRC8DQ7L1W4 858 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 LNX1Q8TBB1 728 aaPredicted RBP18.08■□□□□ 0.48
NELFCD-201ENST00000460601 CHST12Q9NRB3 414 aa18.08■□□□□ 0.48
NELFCD-201ENST00000460601 PTGESO14684 152 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 OFD1O75665 1012 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 ATF7P17544 494 aaPredicted RBP18.07■□□□□ 0.48
NELFCD-201ENST00000460601 ACO1P21399 889 aaKnown RBP18.07■□□□□ 0.48
NELFCD-201ENST00000460601 ARHGAP25P42331 645 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 CTCFP49711 727 aaPredicted RBP18.07■□□□□ 0.48
NELFCD-201ENST00000460601 SLC18A3Q16572 532 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 TRIM60Q495X7 471 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 NOP9Q86U38 636 aaKnown RBP18.07■□□□□ 0.48
NELFCD-201ENST00000460601 GSTCDQ8NEC7 633 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 EPS8L1Q8TE68 723 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 SYT11Q9BT88 431 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 PACSIN1Q9BY11 444 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 DDX3XO00571 662 aaKnown RBP eCLIP18.07■□□□□ 0.489e-18■■□□□ 14.4
NELFCD-201ENST00000460601 FANCGO15287 622 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 NBNO60934 754 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 CAND2O75155 1236 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 DSC3Q14574 896 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 SPA17Q15506 151 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 TMEM270Q6UE05 265 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 AGMOQ6ZNB7 445 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 GAD1Q99259 594 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 DAAM1Q9Y4D1 1078 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 PCDHA13Q9Y5I0 950 aa18.07■□□□□ 0.48
NELFCD-201ENST00000460601 LCA5LO95447 670 aa18.06■□□□□ 0.48
NELFCD-201ENST00000460601 SELPP16109 830 aa18.06■□□□□ 0.48
NELFCD-201ENST00000460601 CDH8P55286 799 aa18.06■□□□□ 0.48
NELFCD-201ENST00000460601 PTPN14Q15678 1187 aa18.06■□□□□ 0.48
NELFCD-201ENST00000460601 ZNF394Q53GI3 561 aa18.06■□□□□ 0.48
NELFCD-201ENST00000460601 DNTTIP2Q5QJE6 756 aaKnown RBP18.06■□□□□ 0.48
NELFCD-201ENST00000460601 RTN4RL1Q86UN2 441 aaPredicted RBP18.06■□□□□ 0.48
NELFCD-201ENST00000460601 CD302Q8IX05 232 aa18.06■□□□□ 0.48
NELFCD-201ENST00000460601 CAGE1Q8TC20 777 aa18.06■□□□□ 0.48
NELFCD-201ENST00000460601 SCLYQ96I15 445 aa18.06■□□□□ 0.48
NELFCD-201ENST00000460601 NIF3L1Q9GZT8 377 aa18.06■□□□□ 0.48
NELFCD-201ENST00000460601 SEPT11Q9NVA2 429 aaKnown RBP18.06■□□□□ 0.48
NELFCD-201ENST00000460601 BZW2Q9Y6E2 419 aaKnown RBP18.06■□□□□ 0.48
NELFCD-201ENST00000460601 SCN1AP35498 2009 aa18.06■□□□□ 0.48
NELFCD-201ENST00000460601 TMCO5BA8MYB1 307 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 IPO7O95373 1038 aaKnown RBP18.05■□□□□ 0.48
NELFCD-201ENST00000460601 IGFBP6P24592 240 aaPredicted RBP18.05■□□□□ 0.48
NELFCD-201ENST00000460601 SSTR3P32745 418 aaPredicted RBP18.05■□□□□ 0.48
NELFCD-201ENST00000460601 GJA8P48165 433 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 FAAP100Q0VG06 881 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 KIAA1328Q86T90 577 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 LINC01599Q8WXQ3 324 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 HPDLQ96IR7 371 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 PPP1R12CQ9BZL4 782 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 MIOSQ9NXC5 875 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 TAS2R14Q9NYV8 317 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 NOCTQ9UK39 431 aaKnown RBP18.05■□□□□ 0.48
NELFCD-201ENST00000460601 ITGA11Q9UKX5 1188 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 COL6A1P12109 1028 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 ITGA4P13612 1032 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 TNNT1P13805 278 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 CYP11B1P15538 503 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 KRT83P78385 493 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 TLE2Q04725 743 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 XKR4Q5GH76 650 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 ENOSF1Q7L5Y1 443 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 PAWRQ96IZ0 340 aaKnown RBP18.05■□□□□ 0.48
NELFCD-201ENST00000460601 SDCBP2Q9H190 292 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 SMYD3Q9H7B4 428 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 NAGPAQ9UK23 515 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 GUCA1BQ9UMX6 200 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 PCDHB4Q9Y5E5 795 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 TET1Q8NFU7 2136 aa18.05■□□□□ 0.48
NELFCD-201ENST00000460601 PDCD11Q14690 1871 aaKnown RBP18.05■□□□□ 0.48
NELFCD-201ENST00000460601 A0A0U1RQF3 1178 aa18.04■□□□□ 0.48
NELFCD-201ENST00000460601 MMEP08473 750 aa18.04■□□□□ 0.48
NELFCD-201ENST00000460601 TBXAS1P24557 533 aaPredicted RBP18.04■□□□□ 0.48
NELFCD-201ENST00000460601 CCL23P55773 120 aa18.04■□□□□ 0.48
NELFCD-201ENST00000460601 ORC1Q13415 861 aa18.04■□□□□ 0.48
NELFCD-201ENST00000460601 ARHGAP29Q52LW3 1261 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms