RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 YWHABP31946 246 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 MARCKSL1P49006 195 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CCNG1P51959 295 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CACNB3P54284 484 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 SLC8A3P57103 927 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 KRT17Q04695 432 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 MCL1Q07820 350 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CYP24A1Q07973 514 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 STRN3Q13033 797 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CBLBQ13191 982 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 KLF1Q13351 362 aaPredicted RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 PTPROQ16827 1216 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CCDC142Q17RM4 750 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 SHROOM1Q2M3G4 852 aaPredicted RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 LRRC38Q5VT99 294 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CST9Q5W186 159 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 TLDC1Q6P9B6 456 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CCDC174Q6PII3 467 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 VSTM1Q6UX27 236 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ADAT2Q7Z6V5 191 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 SLC47A2Q86VL8 602 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 FAM228AQ86W67 206 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 KSR1Q8IVT5 923 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 RHOT1Q8IXI2 618 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 KATNAL2Q8IYT4 538 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 PPM1KQ8N3J5 372 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 MAB21L3Q8N8X9 362 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 RDH13Q8NBN7 331 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 MCPH1Q8NEM0 835 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 EXD1Q8NHP7 514 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 GIMAP7Q8NHV1 300 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 EPS8L3Q8TE67 593 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 SH3TC2Q8TF17 1288 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CLEC4DQ8WXI8 215 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 SEMA4DQ92854 862 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 SLC10A4Q96EP9 437 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 DDX27Q96GQ7 796 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 TEPSINQ96N21 525 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 PRMT1Q99873 361 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ELAC2Q9BQ52 826 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ZNF341Q9BYN7 854 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 FRMD8P1Q9BZ68 369 aaPredicted RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 GLIS2Q9BZE0 524 aaPredicted RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 TRIM7Q9C029 511 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 IKZF4Q9H2S9 585 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 PCIF1Q9H4Z3 704 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 CXorf56Q9H5V9 222 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 RXFP1Q9HBX9 757 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 NOD2Q9HC29 1040 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 LRRC4CQ9HCJ2 640 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 SSU72Q9NP77 194 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 PDLIM7Q9NR12 457 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ARHGEF3Q9NR81 526 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 EURLQ9NYK6 297 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 TCEAL9Q9UHQ7 104 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ZNF112Q9UJU3 913 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ANAPC5Q9UJX4 755 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ABT1Q9ULW3 272 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 DRG1Q9Y295 367 aaKnown RBP6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 EFR3BQ9Y2G0 817 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 STYXL1Q9Y6J8 313 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 SCINQ9Y6U3 715 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 LCTP09848 1927 aa6.52□□□□□ -1.37
UBQLN4-202ENST00000459954 ASTN2O75129 1339 aaPredicted RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 MYPNQ86TC9 1320 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 TMEM120BA0PK00 339 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 CLRN2A0PK11 232 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 TMEM110-MUSTN1A8MSY1 372 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 TCP10L2B9ZVM9 353 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ANKRD63C9JTQ0 380 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 HNRNPCL1O60812 293 aaKnown RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 STAM2O75886 525 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 LDHAP00338 332 aaKnown RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ADRB2P07550 413 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 SLURP2P0DP57 97 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 CCNB1P14635 433 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ATF2P15336 505 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 TSHRP16473 764 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 FGFR4P22455 802 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 CCND1P24385 295 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 TBXAS1P24557 533 aaPredicted RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ADSSP30520 456 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ELF1P32519 619 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 COPB2P35606 906 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 AP3M2P53677 418 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 ITGA8P53708 1063 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 PEX3P56589 373 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 HUNKP57058 714 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 MRPS9P82933 396 aaKnown RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 IL9RQ01113 521 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 TAP1Q03518 808 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 SREBF2Q12772 1141 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 DMP1Q13316 513 aaPredicted RBP6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 MTMR1Q13613 665 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 CRYMQ14894 314 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 PSMD6Q15008 389 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 MTFR1Q15390 333 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 SPRED3Q2MJR0 410 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 PARP6Q2NL67 630 aa6.51□□□□□ -1.37
UBQLN4-202ENST00000459954 NOL9Q5SY16 702 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms