RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 DPP7Q9UHL4 492 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 C2CD2Q9Y426 696 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 NCOR1O75376 2440 aa22.5■■□□□ 1.19
VARS-218ENST00000459667 SYN3O14994 580 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 KIAA0391O15091 583 aaKnown RBP22.49■■□□□ 1.19
VARS-218ENST00000459667 TGM5O43548 720 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 EXTL3O43909 919 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 ZNF202O95125 648 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 KMT5BQ4FZB7 885 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 KANK3Q6NY19 840 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 ANKS3Q6ZW76 656 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 GPD1LQ8N335 351 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 SUSD3Q96L08 255 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 CD320Q9NPF0 282 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 RBAKQ9NYW8 714 aaPredicted RBP22.49■■□□□ 1.19
VARS-218ENST00000459667 MTRRQ9UBK8 725 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 CDH22Q9UJ99 828 aa22.49■■□□□ 1.19
VARS-218ENST00000459667 TULP1O00294 542 aaPredicted RBP22.48■■□□□ 1.19
VARS-218ENST00000459667 C1RP00736 705 aa22.48■■□□□ 1.19
VARS-218ENST00000459667 PRR29P0C7W0 189 aa22.48■■□□□ 1.19
VARS-218ENST00000459667 SPATA31D3P0C874 917 aa22.48■■□□□ 1.19
VARS-218ENST00000459667 BMT2Q1RMZ1 405 aa22.48■■□□□ 1.19
VARS-218ENST00000459667 TMC5Q6UXY8 1006 aa22.48■■□□□ 1.19
VARS-218ENST00000459667 SPATA31D4Q6ZUB0 917 aa22.48■■□□□ 1.19
VARS-218ENST00000459667 EFCAB13Q8IY85 973 aa22.48■■□□□ 1.19
VARS-218ENST00000459667 PHF7Q9BWX1 381 aaPredicted RBP22.48■■□□□ 1.19
VARS-218ENST00000459667 MTCL1Q9Y4B5 1905 aaKnown RBP22.47■■□□□ 1.19
VARS-218ENST00000459667 C19orf67A6NJJ6 358 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 PPEF2O14830 753 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 TGFB1I1O43294 461 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 RPN1P04843 607 aaKnown RBP22.47■■□□□ 1.19
VARS-218ENST00000459667 WEE2P0C1S8 567 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 MTHFRP42898 656 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 WNT7BP56706 349 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 PSMD2Q13200 908 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 VARS2Q5ST30 1063 aaKnown RBP22.47■■□□□ 1.19
VARS-218ENST00000459667 LILRA6Q6PI73 481 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 NT5DC4Q86YG4 428 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 HDAC7Q8WUI4 952 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 RIPOR3Q96MK2 946 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 NECTIN4Q96NY8 510 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 PLEKHA4Q9H4M7 779 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 AGPAT3Q9NRZ7 376 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 HSPBP1Q9NZL4 362 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 BACE2Q9Y5Z0 518 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 CDY1Q9Y6F8 540 aa22.47■■□□□ 1.19
VARS-218ENST00000459667 ADAM12O43184 909 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 OR1D2P34982 312 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 STK4Q13043 487 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 ATAT1Q5SQI0 421 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 C9orf57Q5W0N0 161 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 HS2ST1Q7LGA3 356 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 KIAA0895Q8NCT3 520 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 KREMEN2Q8NCW0 462 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 APPL2Q8NEU8 664 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 CCDC47Q96A33 483 aaKnown RBP22.46■■□□□ 1.19
VARS-218ENST00000459667 CCDC34Q96HJ3 373 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 DPP3Q9NY33 737 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 PCDHB8Q9UN66 801 aa22.46■■□□□ 1.19
VARS-218ENST00000459667 H7C4K7 107 aa22.45■■□□□ 1.18
VARS-218ENST00000459667 M0QZQ0 153 aa22.45■■□□□ 1.18
VARS-218ENST00000459667 AARSP49588 968 aaKnown RBP eCLIP22.45■■□□□ 1.18
VARS-218ENST00000459667 SNRPFP62306 86 aaKnown RBP22.45■■□□□ 1.18
VARS-218ENST00000459667 DPYDQ12882 1025 aa22.45■■□□□ 1.18
VARS-218ENST00000459667 RAB33AQ14088 237 aa22.45■■□□□ 1.18
VARS-218ENST00000459667 KNOP1Q1ED39 458 aaKnown RBP22.45■■□□□ 1.18
VARS-218ENST00000459667 RSPO2Q6UXX9 243 aaPredicted RBP22.45■■□□□ 1.18
VARS-218ENST00000459667 DSTYKQ6XUX3 929 aa22.45■■□□□ 1.18
VARS-218ENST00000459667 GPR149Q86SP6 731 aa22.45■■□□□ 1.18
VARS-218ENST00000459667 FEZF2Q8TBJ5 459 aa22.45■■□□□ 1.18
VARS-218ENST00000459667 RPGRIP1Q96KN7 1286 aa22.45■■□□□ 1.18
VARS-218ENST00000459667 POMKQ9H5K3 350 aa22.45■■□□□ 1.18
VARS-218ENST00000459667 FBXW11Q9UKB1 542 aa22.45■■□□□ 1.18
VARS-218ENST00000459667 ANO9A1A5B4 782 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 ZNF233A6NK53 670 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 PIRO00625 290 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 CLIC2O15247 247 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 RFPL2O75678 378 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 TFAMQ00059 246 aaKnown RBP22.44■■□□□ 1.18
VARS-218ENST00000459667 MRPL58Q14197 206 aaKnown RBP22.44■■□□□ 1.18
VARS-218ENST00000459667 C2orf16Q68DN1 1984 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 ZNF280DQ6N043 979 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 C15orf39Q6ZRI6 1047 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 CBWD2Q8IUF1 395 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 FMR1NBQ8N0W7 255 aaPredicted RBP22.44■■□□□ 1.18
VARS-218ENST00000459667 CMASQ8NFW8 434 aaPredicted RBP22.44■■□□□ 1.18
VARS-218ENST00000459667 KIAA1586Q9HCI6 787 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 PDE11AQ9HCR9 933 aa22.44■■□□□ 1.18
VARS-218ENST00000459667 CGNQ9P2M7 1197 aaKnown RBP22.44■■□□□ 1.18
VARS-218ENST00000459667 C5orf42Q9H799 3197 aa22.43■■□□□ 1.18
VARS-218ENST00000459667 CCDC195A0A1B0GUA6 201 aa22.43■■□□□ 1.18
VARS-218ENST00000459667 LOC730098B7Z3J9 87 aa22.43■■□□□ 1.18
VARS-218ENST00000459667 PAX3P23760 479 aa22.43■■□□□ 1.18
VARS-218ENST00000459667 CYP2J2P51589 502 aa22.43■■□□□ 1.18
VARS-218ENST00000459667 LILRA4P59901 499 aa22.43■■□□□ 1.18
VARS-218ENST00000459667 CTXN3Q4LDR2 81 aa22.43■■□□□ 1.18
VARS-218ENST00000459667 LIN9Q5TKA1 542 aa22.43■■□□□ 1.18
VARS-218ENST00000459667 SLC8B1Q6J4K2 584 aa22.43■■□□□ 1.18
VARS-218ENST00000459667 ZDHHC7Q9NXF8 308 aa22.43■■□□□ 1.18
VARS-218ENST00000459667 FBXL5Q9UKA1 691 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms