RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 SNW1Q13573 536 aaKnown RBP17.49■□□□□ 0.39
CD28-203ENST00000458610 SMAD2Q15796 467 aaKnown RBP17.49■□□□□ 0.39
CD28-203ENST00000458610 PRSS55Q6UWB4 352 aaPredicted RBP17.49■□□□□ 0.39
CD28-203ENST00000458610 DSTYKQ6XUX3 929 aa17.49■□□□□ 0.39
CD28-203ENST00000458610 C12orf56Q8IXR9 622 aa17.49■□□□□ 0.39
CD28-203ENST00000458610 C3orf58Q8NDZ4 430 aa17.49■□□□□ 0.39
CD28-203ENST00000458610 NECTIN4Q96NY8 510 aa17.49■□□□□ 0.39
CD28-203ENST00000458610 UHRF1Q96T88 793 aaPredicted RBP17.49■□□□□ 0.39
CD28-203ENST00000458610 POP1Q99575 1024 aaKnown RBP17.49■□□□□ 0.39
CD28-203ENST00000458610 OXCT2Q9BYC2 517 aaPredicted RBP17.49■□□□□ 0.39
CD28-203ENST00000458610 ADAM7Q9H2U9 754 aa17.49■□□□□ 0.39
CD28-203ENST00000458610 CDH23Q9H251 3354 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 PDXKO00764 312 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 PRPF40AO75400 957 aaKnown RBP17.48■□□□□ 0.39
CD28-203ENST00000458610 EPCAMP16422 314 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 PNPLA4P41247 253 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 RBM10P98175 930 aaKnown RBP17.48■□□□□ 0.39
CD28-203ENST00000458610 TFAMQ00059 246 aaKnown RBP17.48■□□□□ 0.39
CD28-203ENST00000458610 MYBPC2Q14324 1141 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 ATAT1Q5SQI0 421 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 C9orf57Q5W0N0 161 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 SYCE2Q6PIF2 218 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 CYP26C1Q6V0L0 522 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 PALB2Q86YC2 1186 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 KIAA0895Q8NCT3 520 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 RIPOR3Q96MK2 946 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 GSDMAQ96QA5 445 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 COL25A1Q9BXS0 654 aaPredicted RBP17.48■□□□□ 0.39
CD28-203ENST00000458610 S1PR5Q9H228 398 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 SFXN1Q9H9B4 322 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 MTRRQ9UBK8 725 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 PCDHB8Q9UN66 801 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 CITO14578 2027 aa17.48■□□□□ 0.39
CD28-203ENST00000458610 I3L4J1 428 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 PIRO00625 290 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 CLIC2O15247 247 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 CALUO43852 315 aaPredicted RBP17.47■□□□□ 0.39
CD28-203ENST00000458610 EXOC3O60645 756 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 PRR29P0C7W0 189 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 IL9P15248 144 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 TKTP29401 623 aaKnown RBP17.47■□□□□ 0.39
CD28-203ENST00000458610 MTHFRP42898 656 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 RAB33AQ14088 237 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 SNRNP35Q16560 246 aaKnown RBP17.47■□□□□ 0.39
CD28-203ENST00000458610 RTL10Q7L3V2 364 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 USP37Q86T82 979 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 TMEM174Q8WUU8 243 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 SMARCE1Q969G3 411 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 ANKRD36BP1Q96IX9 119 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 CLSTN3Q9BQT9 956 aa17.47■□□□□ 0.39
CD28-203ENST00000458610 USP15Q9Y4E8 981 aaPredicted RBP17.47■□□□□ 0.39
CD28-203ENST00000458610 ANO9A1A5B4 782 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 M0QZQ0 153 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 TNNC2P02585 160 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 TMEM191BP0C7N4 346 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 AARSP49588 968 aaKnown RBP eCLIP17.46■□□□□ 0.39
CD28-203ENST00000458610 TAF6P49848 677 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 CYP2J2P51589 502 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 LILRA4P59901 499 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 UBE2HP62256 183 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 DUOXA2Q1HG44 320 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 VARS2Q5ST30 1063 aaKnown RBP17.46■□□□□ 0.39
CD28-203ENST00000458610 ZNF280DQ6N043 979 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 LILRA6Q6PI73 481 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 SLC9A9Q8IVB4 645 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 GUF1Q8N442 669 aaKnown RBP17.46■□□□□ 0.39
CD28-203ENST00000458610 CMASQ8NFW8 434 aaPredicted RBP17.46■□□□□ 0.39
CD28-203ENST00000458610 ZNF560Q96MR9 790 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 FNBP1Q96RU3 617 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 PDE11AQ9HCR9 933 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 ITGA11Q9UKX5 1188 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 DSEQ9UL01 958 aa17.46■□□□□ 0.39
CD28-203ENST00000458610 TGM5O43548 720 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 RPL17P18621 184 aaKnown RBP17.45■□□□□ 0.38
CD28-203ENST00000458610 TYMPP19971 482 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 RPL13P26373 211 aaKnown RBP17.45■□□□□ 0.38
CD28-203ENST00000458610 OR1D2P34982 312 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 GUCY2FP51841 1108 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 RBP5P82980 135 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 YWHAHQ04917 246 aaPredicted RBP17.45■□□□□ 0.38
CD28-203ENST00000458610 PNOCQ13519 176 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 CBX2Q14781 532 aaPredicted RBP17.45■□□□□ 0.38
CD28-203ENST00000458610 UVSSAQ2YD98 709 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 SV2CQ496J9 727 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 CTXN3Q4LDR2 81 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 RARS2Q5T160 578 aaKnown RBP17.45■□□□□ 0.38
CD28-203ENST00000458610 LIN9Q5TKA1 542 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 C15orf39Q6ZRI6 1047 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 METTL23Q86XA0 190 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 CBWD2Q8IUF1 395 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 GLYCTKQ8IVS8 523 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 ADHFE1Q8IWW8 467 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 RDH13Q8NBN7 331 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 KREMEN2Q8NCW0 462 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 ZSWIM2Q8NEG5 633 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 SUSD6Q92537 303 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 IPO9Q96P70 1041 aaKnown RBP17.45■□□□□ 0.38
CD28-203ENST00000458610 PHF7Q9BWX1 381 aaPredicted RBP17.45■□□□□ 0.38
CD28-203ENST00000458610 MAN1C1Q9NR34 630 aa17.45■□□□□ 0.38
CD28-203ENST00000458610 ZDHHC7Q9NXF8 308 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms