RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 RIN3Q8TB24 985 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 TADA2AO75478 443 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 ATP2C1P98194 919 aaPredicted RBP20.63■□□□□ 0.89
SNX27-204ENST00000458013 FAXCQ5TGI0 409 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 RBM15Q96T37 977 aaKnown RBP eCLIP20.63■□□□□ 0.89
SNX27-204ENST00000458013 GALCP54803 685 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 GOLGA7BQ2TAP0 167 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 ERLEC1Q96DZ1 483 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 TARSL2A2RTX5 802 aaKnown RBP20.63■□□□□ 0.89
SNX27-204ENST00000458013 RAD51CO43502 376 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 L3MBTL3Q96JM7 780 aaPredicted RBP20.63■□□□□ 0.89
SNX27-204ENST00000458013 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
SNX27-204ENST00000458013 DISP1Q96F81 1524 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 PRR23AA6NEV1 266 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 PDGFRAP16234 1089 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 SENP7Q9BQF6 1050 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 OSBPL5Q9H0X9 879 aaPredicted RBP20.62■□□□□ 0.89
SNX27-204ENST00000458013 EPN3Q9H201 632 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 SRP72O76094 671 aaKnown RBP20.62■□□□□ 0.89
SNX27-204ENST00000458013 IMPDH2P12268 514 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 KCNJ1P48048 391 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 ANKS3Q6ZW76 656 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 TMCO5AQ8N6Q1 288 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 PTCH1Q13635 1447 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 MYL2P10916 166 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 BRD2P25440 801 aaKnown RBP20.62■□□□□ 0.89
SNX27-204ENST00000458013 C2CD6Q53TS8 623 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 ELMSAN1Q6PJG2 1045 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 MYO3BQ8WXR4 1341 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 STX3Q13277 289 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 ANGPT1Q15389 498 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 FRMD5Q7Z6J6 570 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 DAB1O75553 588 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 DHX34Q14147 1143 aaKnown RBP20.62■□□□□ 0.89
SNX27-204ENST00000458013 RCOR2Q8IZ40 523 aa20.62■□□□□ 0.89
SNX27-204ENST00000458013 RPS6KA4O75676 772 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 SGF29Q96ES7 293 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 USE1Q9NZ43 259 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 APEX2Q9UBZ4 518 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 CDYLQ9Y232 598 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 CYTH3O43739 400 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 ORC4O43929 436 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 STAT5BP51692 787 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 SKOR1P84550 965 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 ATL2Q8NHH9 583 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 C18orf8Q96DM3 657 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 RAD18Q9NS91 495 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 MRPL42Q9Y6G3 142 aaKnown RBP20.61■□□□□ 0.89
SNX27-204ENST00000458013 TWF1Q12792 350 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 OVGP1Q12889 678 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 SLC9A1P19634 815 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 MROH9Q5TGP6 573 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 WWP1Q9H0M0 922 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 FAM96AQ9H5X1 160 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 INPP5AQ14642 412 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 CEP55Q53EZ4 464 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 ZRANB3Q5FWF4 1079 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 MFSD14CQ5VZR4 134 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 FAM71DQ8N9W8 422 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 SNX12Q9UMY4 172 aa20.61■□□□□ 0.89
SNX27-204ENST00000458013 LOC100653049A0A140TA62 436 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 CAND2O75155 1236 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 KRT34O76011 436 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 EPB42P16452 691 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 KCNA3P22001 575 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 RFX3P48380 749 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 TMEM132DQ14C87 1099 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 RBBP8NLQ8NC74 664 aaPredicted RBP20.6■□□□□ 0.89
SNX27-204ENST00000458013 C1orf131Q8NDD1 294 aaKnown RBP20.6■□□□□ 0.89
SNX27-204ENST00000458013 FAM84BQ96KN1 310 aaPredicted RBP20.6■□□□□ 0.89
SNX27-204ENST00000458013 PCDHA10Q9Y5I2 948 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 RASSF10A6NK89 507 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 TBC1D4O60343 1298 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 PLEKHG1Q9ULL1 1385 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 LINC00854A0A1B0GVQ3 168 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 MZF1P28698 734 aaPredicted RBP20.6■□□□□ 0.89
SNX27-204ENST00000458013 CHI3L2Q15782 390 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 MGAT5BQ3V5L5 792 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 HORMAD1Q86X24 394 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 SRPK1Q96SB4 655 aaKnown RBP20.6■□□□□ 0.89
SNX27-204ENST00000458013 EYA4O95677 639 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 NCOA4Q13772 614 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 KAT2BQ92831 832 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 ERP27Q96DN0 273 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 SEC16BQ96JE7 1060 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 LATS2Q9NRM7 1088 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 NDUFS3O75489 264 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 PLA2G4AP47712 749 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 HSD17B4P51659 736 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 ITGA8P53708 1063 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 SLC16A1P53985 500 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 GTF2H3Q13889 308 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 PLEKHM3Q6ZWE6 761 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 MAP3K20Q9NYL2 800 aaKnown RBP20.6■□□□□ 0.89
SNX27-204ENST00000458013 FBXO40Q9UH90 709 aa20.6■□□□□ 0.89
SNX27-204ENST00000458013 ZNF200P98182 395 aaPredicted RBP20.59■□□□□ 0.89
SNX27-204ENST00000458013 EME1Q96AY2 570 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 KLK14Q9P0G3 267 aa20.59■□□□□ 0.89
SNX27-204ENST00000458013 C3orf70A6NLC5 250 aaPredicted RBP20.59■□□□□ 0.89
SNX27-204ENST00000458013 SMNDC1O75940 238 aaKnown RBP eCLIP20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms