RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 ARPP19P56211 112 aa17.61■□□□□ 0.41
CPSF6-203ENST00000456847 RESP18Q5W5W9 173 aa17.61■□□□□ 0.41
CPSF6-203ENST00000456847 ZDHHC14Q8IZN3 488 aa17.61■□□□□ 0.41
CPSF6-203ENST00000456847 APPL2Q8NEU8 664 aa17.61■□□□□ 0.41
CPSF6-203ENST00000456847 NOC3LQ8WTT2 800 aaKnown RBP17.61■□□□□ 0.41
CPSF6-203ENST00000456847 ZNF707Q96C28 371 aaPredicted RBP17.61■□□□□ 0.41
CPSF6-203ENST00000456847 FGFBP2Q9BYJ0 223 aa17.61■□□□□ 0.41
CPSF6-203ENST00000456847 RHOBTB2Q9BYZ6 727 aa17.61■□□□□ 0.41
CPSF6-203ENST00000456847 TRIM9Q9C026 710 aa17.61■□□□□ 0.41
CPSF6-203ENST00000456847 WDR6Q9NNW5 1121 aaKnown RBP17.61■□□□□ 0.41
CPSF6-203ENST00000456847 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
CPSF6-203ENST00000456847 PRPF6O94906 941 aaKnown RBP17.6■□□□□ 0.41
CPSF6-203ENST00000456847 KRT85P78386 507 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 BECN1Q14457 450 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 ZBTB6Q15916 424 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 CTXN3Q4LDR2 81 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 ZNF280DQ6N043 979 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 RSPO2Q6UXX9 243 aaPredicted RBP17.6■□□□□ 0.41
CPSF6-203ENST00000456847 DSTYKQ6XUX3 929 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 SLC7A14Q8TBB6 771 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 PYM1Q9BRP8 204 aaKnown RBP17.6■□□□□ 0.41
CPSF6-203ENST00000456847 TMEM206Q9H813 350 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 RCOR1Q9UKL0 485 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 PCDHB8Q9UN66 801 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 POLIQ9UNA4 740 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 HCN4Q9Y3Q4 1203 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 TCHHQ07283 1943 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 ADRB2P07550 413 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 SPATA1Q5VX52 437 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 GET4Q7L5D6 327 aaPredicted RBP17.6■□□□□ 0.41
CPSF6-203ENST00000456847 CEP57L1Q8IYX8 460 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 SAAL1Q96ER3 474 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 SPATA32Q96LK8 384 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 FAM213AQ9BRX8 229 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 ASB7Q9H672 318 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 LIMD1Q9UGP4 676 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 RAPGEFL1Q9UHV5 662 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 DERAQ9Y315 318 aa17.6■□□□□ 0.41
CPSF6-203ENST00000456847 CCL16O15467 120 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 XYLBO75191 536 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 ASGR2P07307 311 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 HNRNPA1P09651 372 aaKnown RBP eCLIP17.59■□□□□ 0.41
CPSF6-203ENST00000456847 ROR1Q01973 937 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 MTMR3Q13615 1198 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 TRIM67Q6ZTA4 783 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 HPS3Q969F9 1004 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 SORCS3Q9UPU3 1222 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 TMEM221A6NGB7 291 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 M0R296 226 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 IL18RAPO95256 599 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 ADSSP30520 456 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 ELF1P32519 619 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 ARMCX5Q6P1M9 558 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 USP37Q86T82 979 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 C7orf25Q9BPX7 421 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 FBXL5Q9UKA1 691 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 KCNH3Q9ULD8 1083 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 ATP6V1DQ9Y5K8 247 aa17.59■□□□□ 0.41
CPSF6-203ENST00000456847 MYO10Q9HD67 2058 aa17.58■□□□□ 0.41
CPSF6-203ENST00000456847 TSC2P49815 1807 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 PPEF2O14830 753 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 LDHAP00338 332 aaKnown RBP17.58■□□□□ 0.4
CPSF6-203ENST00000456847 CPB1P15086 417 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 GARTP22102 1010 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 HOXA9P31269 272 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 AFMP43652 599 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 YWHAHQ04917 246 aaPredicted RBP17.58■□□□□ 0.4
CPSF6-203ENST00000456847 SIGLEC14Q08ET2 396 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 FAM26FQ5R3K3 315 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 SLC8B1Q6J4K2 584 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 GRASPQ7Z6J2 395 aaPredicted RBP17.58■□□□□ 0.4
CPSF6-203ENST00000456847 LEO1Q8WVC0 666 aaPredicted RBP17.58■□□□□ 0.4
CPSF6-203ENST00000456847 BLZF1Q9H2G9 400 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 ZDHHC9Q9Y397 364 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 C2CD2Q9Y426 696 aa17.58■□□□□ 0.4
CPSF6-203ENST00000456847 WDR27A2RRH5 827 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 GOLGA8IPA6NC78 632 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 GOLGA8JA6NMD2 632 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 PRRG1O14668 218 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 POU5F1Q01860 360 aaKnown RBP17.57■□□□□ 0.4
CPSF6-203ENST00000456847 UVSSAQ2YD98 709 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 C9orf57Q5W0N0 161 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 CRELD2Q6UXH1 353 aaPredicted RBP17.57■□□□□ 0.4
CPSF6-203ENST00000456847 GLIS3Q8NEA6 775 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 CHAMP1Q96JM3 812 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 CBWD1Q9BRT8 395 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 PCIF1Q9H4Z3 704 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 RBAKQ9NYW8 714 aaPredicted RBP17.57■□□□□ 0.4
CPSF6-203ENST00000456847 TIMM13Q9Y5L4 95 aaPredicted RBP17.57■□□□□ 0.4
CPSF6-203ENST00000456847 M0QZQ0 153 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 PAPLNO95428 1278 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 FSHRP23945 695 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 CASP1P29466 404 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 MRPL58Q14197 206 aaKnown RBP17.57■□□□□ 0.4
CPSF6-203ENST00000456847 CNNM4Q6P4Q7 775 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 HFE2Q6ZVN8 426 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 UNC13DQ70J99 1090 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 BRSK2Q8IWQ3 736 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 ZNF461Q8TAF7 563 aa17.57■□□□□ 0.4
CPSF6-203ENST00000456847 DPP3Q9NY33 737 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms