RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TIMP1P01033 207 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 CHRNB2P17787 502 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 BRD2P25440 801 aaKnown RBP11.5□□□□□ -0.57
PKP4-206ENST00000452162 RFC5P40937 340 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 NAMPTP43490 491 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 MFAP3P55082 362 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 TCEAL1Q15170 157 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 C8orf74Q6P047 294 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 C15orf39Q6ZRI6 1047 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 PEX26Q7Z412 305 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 USP37Q86T82 979 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 NOP9Q86U38 636 aaKnown RBP11.5□□□□□ -0.57
PKP4-206ENST00000452162 SERINC5Q86VE9 423 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 RPUSD2Q8IZ73 545 aaKnown RBP11.5□□□□□ -0.57
PKP4-206ENST00000452162 FBXL13Q8NEE6 735 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 ACTRT1Q8TDG2 376 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 EPS8L1Q8TE68 723 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 BBXQ8WY36 941 aaPredicted RBP11.5□□□□□ -0.57
PKP4-206ENST00000452162 HES6Q96HZ4 224 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 FAM213AQ9BRX8 229 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 THAP2Q9H0W7 228 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 ISCUQ9H1K1 167 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 PDE11AQ9HCR9 933 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 RAB20Q9NX57 234 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 EXTL3O43909 919 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 GNAT1P11488 350 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 ABCB4P21439 1286 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 MAGEA10P43363 369 aaPredicted RBP11.5□□□□□ -0.57
PKP4-206ENST00000452162 LIG4P49917 911 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 HADHBP55084 474 aaKnown RBP11.5□□□□□ -0.57
PKP4-206ENST00000452162 CCL23P55773 120 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 CLDN10P78369 228 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 MRPS25P82663 173 aaKnown RBP11.5□□□□□ -0.57
PKP4-206ENST00000452162 SLC7A5Q01650 507 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 RUFY4Q6ZNE9 571 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 SV2AQ7L0J3 742 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 DAAM2Q86T65 1068 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 PPM1KQ8N3J5 372 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 METTL13Q8N6R0 699 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 PCDHB18PQ96TA0 734 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 TANC1Q9C0D5 1861 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 WNT8AQ9H1J5 351 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 KIAA1586Q9HCI6 787 aa11.5□□□□□ -0.57
PKP4-206ENST00000452162 SEPT11Q9NVA2 429 aaKnown RBP11.5□□□□□ -0.57
PKP4-206ENST00000452162 MBLAC1A4D2B0 266 aaPredicted RBP11.49□□□□□ -0.57
PKP4-206ENST00000452162 ZNF233A6NK53 670 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 POLR3GO15318 223 aaPredicted RBP11.49□□□□□ -0.57
PKP4-206ENST00000452162 PTK7Q13308 1070 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 PRPF4BQ13523 1007 aaKnown RBP11.49□□□□□ -0.57
PKP4-206ENST00000452162 PSMD6Q15008 389 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 TRIM71Q2Q1W2 868 aaKnown RBP11.49□□□□□ -0.57
PKP4-206ENST00000452162 RASGEF1CQ8N431 466 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 PSPC1Q8WXF1 523 aaKnown RBP11.49□□□□□ -0.57
PKP4-206ENST00000452162 SLC7A3Q8WY07 619 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 SCLYQ96I15 445 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 NT5C1BQ96P26 610 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 SELENOOQ9BVL4 669 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.49□□□□□ -0.571e-6■■■■■ 84.9
PKP4-206ENST00000452162 HPCAL4Q9UM19 191 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 COG5Q9UP83 839 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 RRN3P2A6NIE6 340 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 KIAA0391O15091 583 aaKnown RBP11.49□□□□□ -0.57
PKP4-206ENST00000452162 CYP26A1O43174 497 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 DLATP10515 647 aaKnown RBP11.49□□□□□ -0.57
PKP4-206ENST00000452162 USP8P40818 1118 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 TNNT3P45378 269 aaPredicted RBP11.49□□□□□ -0.57
PKP4-206ENST00000452162 AARSP49588 968 aaKnown RBP eCLIP11.49□□□□□ -0.57
PKP4-206ENST00000452162 FAM193AP78312 1265 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 STRN3Q13033 797 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 GPS2Q13227 327 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 PTPROQ16827 1216 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 ZNF516Q92618 1163 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 FAM167AQ96KS9 214 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 HAPLN2Q9GZV7 340 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 NRBP2Q9NSY0 501 aa11.49□□□□□ -0.57
PKP4-206ENST00000452162 LRRIQ4A6NIV6 560 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 CEP104O60308 925 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 ZC3H11AO75152 810 aaKnown RBP eCLIP11.48□□□□□ -0.57
PKP4-206ENST00000452162 FTLP02792 175 aaPredicted RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 EDN1P05305 212 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 CKBP12277 381 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 WNT7BP56706 349 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 NLRP11P59045 1033 aaKnown RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 RNASE9P60153 205 aaKnown RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 FMO1Q01740 532 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 ZNF484Q5JVG2 852 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 MFSD5Q6N075 450 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 MTHFD1LQ6UB35 978 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 CRELD2Q6UXH1 353 aaPredicted RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 SLC47A2Q86VL8 602 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 KRT12Q99456 494 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 GDF15Q99988 308 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 HINFPQ9BQA5 517 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 LBHD1Q9BQE6 289 aaPredicted RBP11.48□□□□□ -0.57
PKP4-206ENST00000452162 ACBD3Q9H3P7 528 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 GDF3Q9NR23 364 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 AMFRQ9UKV5 643 aa11.48□□□□□ -0.57
PKP4-206ENST00000452162 COL1A2P08123 1366 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms